2ou5: Difference between revisions

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{{Seed}}
[[Image:2ou5.png|left|200px]]


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==Crystal structure of a pyridoxamine 5'-phosphate oxidase-related fmn-binding protein (jann_0254) from jannaschia sp. ccs1 at 1.60 A resolution==
The line below this paragraph, containing "STRUCTURE_2ou5", creates the "Structure Box" on the page.
<StructureSection load='2ou5' size='340' side='right'caption='[[2ou5]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2ou5]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Jannaschia_sp._CCS1 Jannaschia sp. CCS1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OU5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OU5 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
{{STRUCTURE_2ou5|  PDB=2ou5  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ou5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ou5 OCA], [https://pdbe.org/2ou5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ou5 RCSB], [https://www.ebi.ac.uk/pdbsum/2ou5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ou5 ProSAT], [https://www.topsan.org/Proteins/JCSG/2ou5 TOPSAN]</span></td></tr>
 
</table>
===Crystal structure of pyridoxamine 5'-phosphate oxidase-related FMN-binding (YP_508196.1) from Jannaschia sp. CCS1 at 1.60 A resolution===
== Function ==
 
[https://www.uniprot.org/uniprot/Q28VU1_JANSC Q28VU1_JANSC]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
2OU5 is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Jannaschia_sp._ccs1 Jannaschia sp. ccs1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OU5 OCA].  
Check<jmol>
[[Category: Jannaschia sp. ccs1]]
  <jmolCheckbox>
[[Category: JCSG, Joint Center for Structural Genomics.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ou/2ou5_consurf.spt"</scriptWhenChecked>
[[Category: Jcsg]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Joint center for structural genomic]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Protein structure initiative]]
  </jmolCheckbox>
[[Category: Psi-2]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ou5 ConSurf].
[[Category: Pyridoxamine 5'-phosphate oxidase]]
<div style="clear:both"></div>
[[Category: Pyridoxamine 5'-phosphate oxidase-related fmn-binding]]
__TOC__
[[Category: Structural genomic]]
</StructureSection>
[[Category: Yp_508196 1]]
[[Category: Jannaschia sp. CCS1]]
 
[[Category: Large Structures]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 14:12:03 2008''

Latest revision as of 01:17, 21 November 2024

Crystal structure of a pyridoxamine 5'-phosphate oxidase-related fmn-binding protein (jann_0254) from jannaschia sp. ccs1 at 1.60 A resolution

2ou5, resolution 1.60Å

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