1t5b: Difference between revisions

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{{Seed}}
[[Image:1t5b.png|left|200px]]


<!--
==Structural genomics, A protein from Salmonella typhimurium similar to E. coli acyl carrier protein phosphodiesterase==
The line below this paragraph, containing "STRUCTURE_1t5b", creates the "Structure Box" on the page.
<StructureSection load='1t5b' size='340' side='right'caption='[[1t5b]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1t5b]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhimurium Salmonella enterica subsp. enterica serovar Typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T5B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1T5B FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.4&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr>
{{STRUCTURE_1t5b|  PDB=1t5b  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1t5b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1t5b OCA], [https://pdbe.org/1t5b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1t5b RCSB], [https://www.ebi.ac.uk/pdbsum/1t5b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1t5b ProSAT], [https://www.topsan.org/Proteins/MCSG/1t5b TOPSAN]</span></td></tr>
 
</table>
===Structural genomics, A protein from Salmonella typhimurium similar to E. coli acyl carrier protein phosphodiesterase===
== Function ==
 
[https://www.uniprot.org/uniprot/AZOR_SALTY AZOR_SALTY] Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity.[HAMAP-Rule:MF_01216]
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
1T5B is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Salmonella_typhimurium Salmonella typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T5B OCA].  
Check<jmol>
[[Category: Salmonella typhimurium]]
  <jmolCheckbox>
[[Category: Collart, F.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/t5/1t5b_consurf.spt"</scriptWhenChecked>
[[Category: Joachimiak, A.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Wu, R.]]
  </jmolCheckbox>
[[Category: Zhang, R.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1t5b ConSurf].
[[Category: Acyl carrier protein phosphodiesterase]]
<div style="clear:both"></div>
[[Category: Alpha/beta/alpha sandwich]]
__TOC__
[[Category: Fmn]]
</StructureSection>
[[Category: Mcsg]]
[[Category: Large Structures]]
[[Category: Midwest center for structural genomic]]
[[Category: Salmonella enterica subsp. enterica serovar Typhimurium]]
[[Category: Protein structure initiative]]
[[Category: Collart F]]
[[Category: Psi]]
[[Category: Joachimiak A]]
[[Category: Structural genomic]]
[[Category: Wu R]]
 
[[Category: Zhang R]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 14:48:15 2008''

Latest revision as of 08:36, 14 February 2024

Structural genomics, A protein from Salmonella typhimurium similar to E. coli acyl carrier protein phosphodiesterase

1t5b, resolution 1.40Å

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