1j2r: Difference between revisions

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{{Seed}}
[[Image:1j2r.png|left|200px]]


<!--
==Crystal structure of Escherichia coli gene product Yecd at 1.3 A resolution==
The line below this paragraph, containing "STRUCTURE_1j2r", creates the "Structure Box" on the page.
<StructureSection load='1j2r' size='340' side='right'caption='[[1j2r]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1j2r]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J2R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1J2R FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.3&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene></td></tr>
{{STRUCTURE_1j2r|  PDB=1j2r  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1j2r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j2r OCA], [https://pdbe.org/1j2r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1j2r RCSB], [https://www.ebi.ac.uk/pdbsum/1j2r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1j2r ProSAT], [https://www.topsan.org/Proteins/BIGS/1j2r TOPSAN]</span></td></tr>
 
</table>
===Crystal structure of Escherichia coli gene product Yecd at 1.3 A resolution===
== Function ==
 
[https://www.uniprot.org/uniprot/YECD_ECOLI YECD_ECOLI]
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
1J2R is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J2R OCA].  
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j2/1j2r_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1j2r ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
[[Category: Abergel, C.]]
[[Category: Large Structures]]
[[Category: Claverie, J M.]]
[[Category: Abergel C]]
[[Category: IGS-CNRS, France BIGSBacterial targets at.]]
[[Category: Claverie J-M]]
[[Category: Suhre, K.]]
[[Category: Suhre K]]
[[Category: Alpha-beta-alpha motif]]
[[Category: Bacterial targets at igs-cnr]]
[[Category: Big]]
[[Category: France]]
[[Category: Parallel beta-sheet 3-2-1-4-5-6]]
[[Category: Structural genomic]]
[[Category: Tetramere]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 15:45:01 2008''

Latest revision as of 07:14, 25 October 2023

Crystal structure of Escherichia coli gene product Yecd at 1.3 A resolution

1j2r, resolution 1.30Å

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