3dnh: Difference between revisions

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{{Seed}}
[[Image:3dnh.png|left|200px]]


<!--
==The crystal structure of the protein Atu2129 (unknown function) from Agrobacterium tumefaciens str. C58==
The line below this paragraph, containing "STRUCTURE_3dnh", creates the "Structure Box" on the page.
<StructureSection load='3dnh' size='340' side='right'caption='[[3dnh]], [[Resolution|resolution]] 1.94&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3dnh]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DNH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DNH FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.94&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_3dnh|  PDB=3dnh  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dnh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dnh OCA], [https://pdbe.org/3dnh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dnh RCSB], [https://www.ebi.ac.uk/pdbsum/3dnh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dnh ProSAT], [https://www.topsan.org/Proteins/MCSG/3dnh TOPSAN]</span></td></tr>
 
</table>
===The crystal structure of the protein Atu2129 (unknown function) from Agrobacterium tumefaciens str. C58===
== Function ==
 
[https://www.uniprot.org/uniprot/A9CI98_AGRFC A9CI98_AGRFC]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3DNH is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens_str._c58 Agrobacterium tumefaciens str. c58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DNH OCA].  
Check<jmol>
[[Category: Agrobacterium tumefaciens str. c58]]
  <jmolCheckbox>
[[Category: Edwards, A.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dn/3dnh_consurf.spt"</scriptWhenChecked>
[[Category: Joachimiak, A.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Savchenko, A.]]
  </jmolCheckbox>
[[Category: Tan, K.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dnh ConSurf].
[[Category: Xu, X.]]
<div style="clear:both"></div>
[[Category: Zheng, H.]]
__TOC__
[[Category: Agrobacterium tumefaciens str. c58]]
</StructureSection>
[[Category: Apc6114]]
[[Category: Agrobacterium fabrum str. C58]]
[[Category: Mcsg]]
[[Category: Large Structures]]
[[Category: Midwest center for structural genomic]]
[[Category: Edwards A]]
[[Category: Protein atu2129]]
[[Category: Joachimiak A]]
[[Category: Protein structure initiative]]
[[Category: Savchenko A]]
[[Category: Psi-2]]
[[Category: Tan K]]
[[Category: Structural genomic]]
[[Category: Xu X]]
[[Category: Unknown function]]
[[Category: Zheng H]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 16:38:56 2008''
Retrieved from "https://proteopedia.org/3dnh"