1vgg: Difference between revisions

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{{Seed}}
[[Image:1vgg.png|left|200px]]


<!--
==Crystal Structure of the Conserved Hypothetical Protein TTHA1091 from Thermus Thermophilus HB8==
The line below this paragraph, containing "STRUCTURE_1vgg", creates the "Structure Box" on the page.
<StructureSection load='1vgg' size='340' side='right'caption='[[1vgg]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1vgg]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VGG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VGG FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.75&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_1vgg|  PDB=1vgg  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vgg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vgg OCA], [https://pdbe.org/1vgg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vgg RCSB], [https://www.ebi.ac.uk/pdbsum/1vgg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vgg ProSAT], [https://www.topsan.org/Proteins/RSGI/1vgg TOPSAN]</span></td></tr>
 
</table>
===Crystal Structure of the Conserved Hypothetical Protein TT1634 from Thermus Thermophilus HB8===
== Function ==
 
[https://www.uniprot.org/uniprot/Q5SJC3_THET8 Q5SJC3_THET8]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
1VGG is a 6 chains structure of sequences from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VGG OCA].  
Check<jmol>
[[Category: Thermus thermophilus]]
  <jmolCheckbox>
[[Category: Ebihara, A.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vg/1vgg_consurf.spt"</scriptWhenChecked>
[[Category: Kousumi, Y.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Kuramitsu, S.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Matsumoto, K.]]
  </jmolCheckbox>
[[Category: Okamoto, A.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1vgg ConSurf].
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
<div style="clear:both"></div>
[[Category: Satoh, S.]]
__TOC__
[[Category: Tanaka, I.]]
</StructureSection>
[[Category: Yao, M.]]
[[Category: Large Structures]]
[[Category: Yokoyama, S.]]
[[Category: Thermus thermophilus HB8]]
[[Category: Conserved hypothetical protein]]
[[Category: Ebihara A]]
[[Category: Riken structural genomics/proteomics initiative]]
[[Category: Kousumi Y]]
[[Category: Rsgi]]
[[Category: Kuramitsu S]]
[[Category: Structural genomic]]
[[Category: Matsumoto K]]
[[Category: Thermus thermophilus hb8]]
[[Category: Okamoto A]]
 
[[Category: Satoh S]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 17:59:01 2008''
[[Category: Tanaka I]]
[[Category: Yao M]]
[[Category: Yokoyama S]]
Retrieved from "https://proteopedia.org/1vgg"