2k5v: Difference between revisions

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{{Seed}}
[[Image:2k5v.png|left|200px]]


<!--
==SOLUTION NMR STRUCTURE OF the second OB-fold domain of replication protein A from Methanococcus maripaludis. NORTHEAST STRUCTURAL GENOMICS TARGET MrR110B.==
The line below this paragraph, containing "STRUCTURE_2k5v", creates the "Structure Box" on the page.
<StructureSection load='2k5v' size='340' side='right'caption='[[2k5v]]' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2k5v]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanococcus_maripaludis Methanococcus maripaludis]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K5V OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2K5V FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2k5v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2k5v OCA], [https://pdbe.org/2k5v PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2k5v RCSB], [https://www.ebi.ac.uk/pdbsum/2k5v PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2k5v ProSAT], [https://www.topsan.org/Proteins/NESGC/2k5v TOPSAN]</span></td></tr>
{{STRUCTURE_2k5v|  PDB=2k5v  |  SCENE=  }}
</table>
 
== Function ==
===SOLUTION NMR STRUCTURE OF the second OB-fold domain of replication protein A from Methanococcus maripaludis. NORTHEAST STRUCTURAL GENOMICS TARGET MrR110B.===
[https://www.uniprot.org/uniprot/Q6LYF9_METMP Q6LYF9_METMP]
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
==About this Structure==
Check<jmol>
2K5V is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Methanococcus_maripaludis Methanococcus maripaludis]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K5V OCA].  
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k5/2k5v_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2k5v ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Methanococcus maripaludis]]
[[Category: Methanococcus maripaludis]]
[[Category: Acton, T B.]]
[[Category: Acton TB]]
[[Category: Aramini, J M.]]
[[Category: Aramini JM]]
[[Category: Ciccosanti, C.]]
[[Category: Ciccosanti C]]
[[Category: Everett, J K.]]
[[Category: Everett JK]]
[[Category: Jiang, M.]]
[[Category: Jiang M]]
[[Category: Maglaqui, M.]]
[[Category: Maglaqui M]]
[[Category: Montelione, G T.]]
[[Category: Montelione GT]]
[[Category: NESG, Northeast Structural Genomics Consortium.]]
[[Category: Nair R]]
[[Category: Nair, R.]]
[[Category: Rost B]]
[[Category: Rost, B.]]
[[Category: Swapna GVT]]
[[Category: Swapna, G VT.]]
[[Category: Xiao R]]
[[Category: Xiao, R.]]
[[Category: Dna binding protein]]
[[Category: Nesg]]
[[Category: Northeast structural genomics consortium]]
[[Category: Ob-fold domain]]
[[Category: Protein structure initiative]]
[[Category: Psi-2]]
[[Category: Replication protein some]]
[[Category: Solution nmr structure]]
[[Category: Structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 18:09:33 2008''
Retrieved from "https://proteopedia.org/2k5v"