2qzu: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:2qzu.png|left|200px]]


<!--
==Crystal structure of the putative sulfatase yidJ from Bacteroides fragilis. Northeast Structural Genomics Consortium target BfR123==
The line below this paragraph, containing "STRUCTURE_2qzu", creates the "Structure Box" on the page.
<StructureSection load='2qzu' size='340' side='right'caption='[[2qzu]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2qzu]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacfr Bacfr]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QZU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QZU FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-->
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1auk|1auk]], [[1hdh|1hdh]]</div></td></tr>
{{STRUCTURE_2qzu|  PDB=2qzu  |  SCENE=  }}
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BF0881 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=295405 BACFR])</td></tr>
 
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qzu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qzu OCA], [https://pdbe.org/2qzu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qzu RCSB], [https://www.ebi.ac.uk/pdbsum/2qzu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qzu ProSAT], [https://www.topsan.org/Proteins/NESGC/2qzu TOPSAN]</span></td></tr>
===Crystal structure of the putative sulfatase yidJ from Bacteroides fragilis. Northeast Structural Genomics Consortium target BfR123===
</table>
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
==About this Structure==
Check<jmol>
2QZU is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Bacteroides_fragilis_ych46 Bacteroides fragilis ych46]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QZU OCA].  
  <jmolCheckbox>
[[Category: Bacteroides fragilis ych46]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qz/2qzu_consurf.spt"</scriptWhenChecked>
[[Category: Abashidze, M.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Acton, T B.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Cunningham, K.]]
  </jmolCheckbox>
[[Category: Hunt, J F.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qzu ConSurf].
[[Category: Maglaqui, M.]]
<div style="clear:both"></div>
[[Category: Montelione, G T.]]
__TOC__
[[Category: NESG, Northeast Structural Genomics Consortium.]]
</StructureSection>
[[Category: Owens, L.]]
[[Category: Bacfr]]
[[Category: Seetharaman, J.]]
[[Category: Large Structures]]
[[Category: Tong, L.]]
[[Category: Abashidze, M]]
[[Category: Vorobiev, S M.]]
[[Category: Acton, T B]]
[[Category: Wang, D.]]
[[Category: Cunningham, K]]
[[Category: Xiao, R.]]
[[Category: Hunt, J F]]
[[Category: Maglaqui, M]]
[[Category: Montelione, G T]]
[[Category: Structural genomic]]
[[Category: Owens, L]]
[[Category: Seetharaman, J]]
[[Category: Tong, L]]
[[Category: Vorobiev, S M]]
[[Category: Wang, D]]
[[Category: Xiao, R]]
[[Category: Arylsulfatase]]
[[Category: Arylsulfatase]]
[[Category: Bfr123]]
[[Category: Bfr123]]
[[Category: Hydrolase]]
[[Category: Hydrolase]]
[[Category: Nesg]]
[[Category: Nesg]]
[[Category: Northeast structural genomics consortium]]
[[Category: PSI, Protein structure initiative]]
[[Category: Protein structure initiative]]
[[Category: Psi-2]]
[[Category: Q64xz4_bacfr]]
[[Category: Q64xz4_bacfr]]
[[Category: Structural genomic]]
[[Category: Sulfatase]]
[[Category: Sulfatase]]
[[Category: Yidj]]
[[Category: Yidj]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 18:33:40 2008''