1uc2: Difference between revisions
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New page: left|200px<br /><applet load="1uc2" size="450" color="white" frame="true" align="right" spinBox="true" caption="1uc2, resolution 2.15Å" /> '''Hypothetical Extein ... |
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== | ==Hypothetical Extein Protein of PH1602 from Pyrococcus horikoshii== | ||
<StructureSection load='1uc2' size='340' side='right'caption='[[1uc2]], [[Resolution|resolution]] 2.15Å' scene=''> | |||
== Structural highlights == | |||
== | <table><tr><td colspan='2'>[[1uc2]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UC2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1UC2 FirstGlance]. <br> | ||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.15Å</td></tr> | |||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FRU:FRUCTOSE'>FRU</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=PRD_900003:sucrose'>PRD_900003</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1uc2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1uc2 OCA], [https://pdbe.org/1uc2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1uc2 RCSB], [https://www.ebi.ac.uk/pdbsum/1uc2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1uc2 ProSAT]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/RTCB_PYRHO RTCB_PYRHO] tRNA-splicing ligase that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as a RNA ligase with broad substrate specificity, and may function toward other RNAs (By similarity). | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/uc/1uc2_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1uc2 ConSurf]. | |||
<div style="clear:both"></div> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Large Structures]] | |||
[[Category: Pyrococcus horikoshii]] | [[Category: Pyrococcus horikoshii]] | ||
[[Category: Maegawa Y]] | |||
[[Category: Maegawa | [[Category: Okada C]] | ||
[[Category: Okada | [[Category: Tanaka I]] | ||
[[Category: Tanaka | [[Category: Yao M]] | ||
[[Category: Yao | |||
Latest revision as of 23:50, 27 December 2023
Hypothetical Extein Protein of PH1602 from Pyrococcus horikoshii
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