3f8h: Difference between revisions

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{{Seed}}
[[Image:3f8h.jpg|left|200px]]


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==Crystal structure of a putative polyketide cyclase (tm1040_3560) from silicibacter sp. tm1040 at 2.00 A resolution==
The line below this paragraph, containing "STRUCTURE_3f8h", creates the "Structure Box" on the page.
<StructureSection load='3f8h' size='340' side='right'caption='[[3f8h]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3f8h]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Ruegeria_sp._TM1040 Ruegeria sp. TM1040]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F8H OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3F8H FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_3f8h|  PDB=3f8h  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3f8h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3f8h OCA], [https://pdbe.org/3f8h PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3f8h RCSB], [https://www.ebi.ac.uk/pdbsum/3f8h PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3f8h ProSAT], [https://www.topsan.org/Proteins/JCSG/3f8h TOPSAN]</span></td></tr>
 
</table>
===Crystal structure of putative polyketide cyclase (YP_611791.1) from SILICIBACTER SP. TM1040 at 2.00 A resolution===
== Function ==
 
[https://www.uniprot.org/uniprot/Q1GLD7_RUEST Q1GLD7_RUEST]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3F8H is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Silicibacter_sp._tm1040 Silicibacter sp. tm1040]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F8H OCA].  
Check<jmol>
[[Category: Silicibacter sp. tm1040]]
  <jmolCheckbox>
[[Category: JCSG, Joint Center for Structural Genomics.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f8/3f8h_consurf.spt"</scriptWhenChecked>
[[Category: Jcsg]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Joint center for structural genomic]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Plasmid]]
  </jmolCheckbox>
[[Category: Protein structure initiative]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3f8h ConSurf].
[[Category: Psi-2]]
<div style="clear:both"></div>
[[Category: Putative polyketide cyclase]]
__TOC__
[[Category: Structural genomic]]
</StructureSection>
[[Category: Unknown function]]
[[Category: Large Structures]]
[[Category: Yp_611791 1]]
[[Category: Ruegeria sp. TM1040]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Nov 27 13:45:29 2008''

Latest revision as of 09:51, 6 November 2024

Crystal structure of a putative polyketide cyclase (tm1040_3560) from silicibacter sp. tm1040 at 2.00 A resolution

3f8h, resolution 2.00Å

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