3f0y: Difference between revisions

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{{Seed}}
[[Image:3f0y.png|left|200px]]


<!--
==Crystal structure of the human Adenovirus type 14 fiber knob==
The line below this paragraph, containing "STRUCTURE_3f0y", creates the "Structure Box" on the page.
<StructureSection load='3f0y' size='340' side='right'caption='[[3f0y]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3f0y]] is a 9 chain structure with sequence from [https://en.wikipedia.org/wiki/Human_adenovirus_14 Human adenovirus 14]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F0Y OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3F0Y FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene></td></tr>
{{STRUCTURE_3f0y|  PDB=3f0y  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3f0y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3f0y OCA], [https://pdbe.org/3f0y PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3f0y RCSB], [https://www.ebi.ac.uk/pdbsum/3f0y PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3f0y ProSAT]</span></td></tr>
 
</table>
===Crystal structure of the human Adenovirus type 14 fiber knob===
== Function ==
 
[https://www.uniprot.org/uniprot/Q8V791_9ADEN Q8V791_9ADEN]
 
== Evolutionary Conservation ==
<!--
[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_18987134}}, adds the Publication Abstract to the page
Check<jmol>
(as it appears on PubMed at http://www.pubmed.gov), where 18987134 is the PubMed ID number.
  <jmolCheckbox>
-->
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f0/3f0y_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_18987134}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
3F0Y is a 9 chains structure of sequences from [http://en.wikipedia.org/wiki/Human_adenovirus_14 Human adenovirus 14]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F0Y OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3f0y ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
An arginine switch in the species B adenovirus knob determines high-affinity engagement of the cellular receptor CD46., Persson BD, Muller S, Reiter DM, Schmitt BB, Marttila M, Sumowski CV, Schweizer S, Scheu U, Ochsenfeld C, Arnberg N, Stehle T, J Virol. 2008 Nov 5. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18987134 18987134]
</StructureSection>
[[Category: Human adenovirus 14]]
[[Category: Human adenovirus 14]]
[[Category: Arnberg, N.]]
[[Category: Large Structures]]
[[Category: Persson, B D.]]
[[Category: Arnberg N]]
[[Category: Reiter, D M.]]
[[Category: Persson BD]]
[[Category: Stehle, T.]]
[[Category: Reiter DM]]
[[Category: Ad14]]
[[Category: Stehle T]]
[[Category: Adenovirus]]
[[Category: Cd46]]
[[Category: Fiber]]
[[Category: Knob]]
[[Category: Trimer]]
[[Category: Viral protein]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri Dec  5 09:57:45 2008''

Latest revision as of 06:37, 3 April 2024

Crystal structure of the human Adenovirus type 14 fiber knob

3f0y, resolution 1.80Å

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