3fcm: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
New page: {{Seed}} left|200px <!-- The line below this paragraph, containing "STRUCTURE_3fcm", creates the "Structure Box" on the page. You may change the PDB parameter (which se...
 
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:3fcm.jpg|left|200px]]


<!--
==Crystal structure of a NUDIX hydrolase from Clostridium perfringens==
The line below this paragraph, containing "STRUCTURE_3fcm", creates the "Structure Box" on the page.
<StructureSection load='3fcm' size='340' side='right'caption='[[3fcm]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FCM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FCM FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_3fcm| PDB=3fcm |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fcm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fcm OCA], [https://pdbe.org/3fcm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fcm RCSB], [https://www.ebi.ac.uk/pdbsum/3fcm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fcm ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3fcm TOPSAN]</span></td></tr>
</table>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fc/3fcm_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3fcm ConSurf].
<div style="clear:both"></div>


===Crystal structure of a NUDIX hydrolase from Clostridium perfringens===
==See Also==
 
*[[Nudix hydrolase 3D structures|Nudix hydrolase 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
3FCM is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Clostridium_perfringens_atcc_13124 Clostridium perfringens atcc 13124]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FCM OCA].
[[Category: Large Structures]]
[[Category: Clostridium perfringens atcc 13124]]
[[Category: Burley SK]]
[[Category: Burley, S K.]]
[[Category: Palani K]]
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
[[Category: Swaninathan S]]
[[Category: Palani, K.]]
[[Category: Swaninathan, S.]]
[[Category: 11180j]]
[[Category: Hydrolase]]
[[Category: New york sgx research center for structural genomic]]
[[Category: Nudix]]
[[Category: Nysgxrc]]
[[Category: Structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Dec 10 15:10:54 2008''
Retrieved from "https://proteopedia.org/3fcm"