3bri: Difference between revisions

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{{Seed}}
[[Image:3bri.png|left|200px]]


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==Crystal Structure of apo-LC8==
The line below this paragraph, containing "STRUCTURE_3bri", creates the "Structure Box" on the page.
<StructureSection load='3bri' size='340' side='right'caption='[[3bri]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3bri]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Drosophila_melanogaster Drosophila melanogaster]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BRI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BRI FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
{{STRUCTURE_3bri| PDB=3bri |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bri FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bri OCA], [https://pdbe.org/3bri PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bri RCSB], [https://www.ebi.ac.uk/pdbsum/3bri PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bri ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/DYL1_DROME DYL1_DROME] Acts as a non-catalytic accessory component of a dynein complex (By similarity).
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/br/3bri_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bri ConSurf].
<div style="clear:both"></div>


===Crystal Structure of apo-LC8===
==See Also==
 
*[[Dynein 3D structures|Dynein 3D structures]]
 
__TOC__
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</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_18948118}}, adds the Publication Abstract to the page
(as it appears on PubMed at http://www.pubmed.gov), where 18948118 is the PubMed ID number.
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{{ABSTRACT_PUBMED_18948118}}
 
==About this Structure==
3BRI is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Drosophila_melanogaster Drosophila melanogaster]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BRI OCA].
 
==Reference==
The interplay of ligand binding and quaternary structure in the diverse interactions of dynein light chain LC8., Benison G, Karplus PA, Barbar E, J Mol Biol. 2008 Dec 26;384(4):954-66. Epub 2008 Oct 11. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18948118 18948118]
[[Category: Drosophila melanogaster]]
[[Category: Drosophila melanogaster]]
[[Category: Barbar, E.]]
[[Category: Large Structures]]
[[Category: Benison, G.]]
[[Category: Barbar E]]
[[Category: Chiodo, M.]]
[[Category: Benison G]]
[[Category: Karplus, P A.]]
[[Category: Chiodo M]]
[[Category: Cytoplasm]]
[[Category: Karplus PA]]
[[Category: Dimer]]
[[Category: Dynein]]
[[Category: Microtubule]]
[[Category: Motor protein]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Dec 10 15:49:36 2008''

Latest revision as of 09:30, 21 February 2024

Crystal Structure of apo-LC8

3bri, resolution 1.70Å

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