3c2p: Difference between revisions

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{{Seed}}
[[Image:3c2p.png|left|200px]]


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==X-ray crystal structure of the N4 mini-vRNAP P1 promoter complex==
The line below this paragraph, containing "STRUCTURE_3c2p", creates the "Structure Box" on the page.
<StructureSection load='3c2p' size='340' side='right'caption='[[3c2p]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3c2p]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_phage_N4 Escherichia phage N4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C2P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3C2P FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3c2p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c2p OCA], [https://pdbe.org/3c2p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3c2p RCSB], [https://www.ebi.ac.uk/pdbsum/3c2p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3c2p ProSAT]</span></td></tr>
{{STRUCTURE_3c2p|  PDB=3c2p  |  SCENE=  }}
</table>
== Function ==
[https://www.uniprot.org/uniprot/RPOLV_BPN4 RPOLV_BPN4] DNA-dependent RNA polymerase, which is injected into the host upon infection and transcribes the phage early genes from promoters that have a 5-bp stem-3 nt loop hairpin structure.<ref>PMID:18362338</ref> <ref>PMID:19061645</ref>  


===X-ray crystal structure of the N4 mini-vRNAP P1 promoter complex===
==See Also==
 
*[[RNA polymerase 3D structures|RNA polymerase 3D structures]]
 
== References ==
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[[Category: Escherichia phage N4]]
{{ABSTRACT_PUBMED_19061645}}
[[Category: Large Structures]]
 
[[Category: Gleghorn ML]]
==About this Structure==
[[Category: Murakami KS]]
3C2P is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Enterobacteria_phage_n4 Enterobacteria phage n4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C2P OCA].
 
==Reference==
Structural basis for DNA-hairpin promoter recognition by the bacteriophage N4 virion RNA polymerase., Gleghorn ML, Davydova EK, Rothman-Denes LB, Murakami KS, Mol Cell. 2008 Dec 5;32(5):707-17. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/19061645 19061645]
[[Category: DNA-directed RNA polymerase]]
[[Category: Enterobacteria phage n4]]
[[Category: Gleghorn, M L.]]
[[Category: Murakami, K S.]]
[[Category: Dna-hairpin]]
[[Category: Nucleotidyltransferase]]
[[Category: Promoter binary complex]]
[[Category: Protein-dna complex]]
[[Category: Transferase/dna complex]]
[[Category: Virion rna polymerase]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Dec 24 10:59:47 2008''
Retrieved from "https://proteopedia.org/3c2p"