3e78: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:3e78.png|left|200px]]


<!--
==Structure determination of the cancer-associated Mycoplasma hyorhinis protein Mh-p37==
The line below this paragraph, containing "STRUCTURE_3e78", creates the "Structure Box" on the page.
<StructureSection load='3e78' size='340' side='right'caption='[[3e78]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3e78]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mesomycoplasma_hyorhinis Mesomycoplasma hyorhinis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E78 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3E78 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=TPP:THIAMINE+DIPHOSPHATE'>TPP</scene></td></tr>
{{STRUCTURE_3e78|  PDB=3e78  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3e78 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3e78 OCA], [https://pdbe.org/3e78 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3e78 RCSB], [https://www.ebi.ac.uk/pdbsum/3e78 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3e78 ProSAT]</span></td></tr>
 
</table>
===Structure determination of the cancer-associated Mycoplasma hyorhinis protein Mh-p37===
== Function ==
 
[https://www.uniprot.org/uniprot/P37_MESHY P37_MESHY]  
 
== Evolutionary Conservation ==
<!--
[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_19020356}}, adds the Publication Abstract to the page
Check<jmol>
(as it appears on PubMed at http://www.pubmed.gov), where 19020356 is the PubMed ID number.
  <jmolCheckbox>
-->
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e7/3e78_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_19020356}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
3E78 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Mycoplasma_hyorhinis Mycoplasma hyorhinis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E78 OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3e78 ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
Structure determination of the cancer-associated Mycoplasma hyorhinis protein Mh-p37., Sippel KH, Robbins AH, Reutzel R, Domsic J, Boehlein SK, Govindasamy L, Agbandje-McKenna M, Rosser CJ, McKenna R, Acta Crystallogr D Biol Crystallogr. 2008 Nov;64(Pt 11):1172-8. Epub 2008, Oct 18. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/19020356 19020356]
</StructureSection>
[[Category: Mycoplasma hyorhinis]]
[[Category: Large Structures]]
[[Category: Single protein]]
[[Category: Mesomycoplasma hyorhinis]]
[[Category: Pdbx_ordinal=, <PDBx:audit_author.]]
[[Category: Domsic J]]
[[Category: Cell membrane]]
[[Category: McKenna R]]
[[Category: Lipoprotein]]
[[Category: Reutzel R]]
[[Category: Membrane]]
[[Category: Robbins AH]]
[[Category: Mycoplasma]]
[[Category: Sippel KH]]
[[Category: P37]]
[[Category: Palmitate]]
[[Category: Tpp]]
[[Category: Tpp binding protein]]
[[Category: Transport]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Dec 24 20:43:06 2008''