2e8g: Difference between revisions

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{{Seed}}
[[Image:2e8g.png|left|200px]]


<!--
==The structure of protein from P. horikoshii at 1.7 angstrom resolution==
The line below this paragraph, containing "STRUCTURE_2e8g", creates the "Structure Box" on the page.
<StructureSection load='2e8g' size='340' side='right'caption='[[2e8g]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2e8g]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2E8G OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2E8G FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2e8g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2e8g OCA], [https://pdbe.org/2e8g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2e8g RCSB], [https://www.ebi.ac.uk/pdbsum/2e8g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2e8g ProSAT]</span></td></tr>
{{STRUCTURE_2e8g|  PDB=2e8g  |  SCENE=  }}
</table>
 
== Function ==
===The structure of protein from P. horikoshii at 1.7 angstrom resolution===
[https://www.uniprot.org/uniprot/O58271_PYRHO O58271_PYRHO]  
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
==About this Structure==
Check<jmol>
2E8G is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2E8G OCA].  
  <jmolCheckbox>
 
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e8/2e8g_consurf.spt"</scriptWhenChecked>
==Reference==
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
Structure of protein PH0536 from Pyrococcus horikoshii at 1.7 A resolution reveals a novel assembly of an oligonucleotide/oligosaccharide-binding fold and an alpha-helical bundle., Gao YG, Yao M, Tanaka I, Proteins. 2008 Apr;71(1):503-8. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18186487 18186487]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Pyrococcus horikoshii]]
  </jmolCheckbox>
[[Category: Single protein]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2e8g ConSurf].
[[Category: Pdbx_ordinal=, <PDBx:audit_author.]]
<div style="clear:both"></div>
[[Category: Alpha-helices bundle]]
__TOC__
[[Category: National project on protein structural and functional analyse]]
</StructureSection>
[[Category: Nppsfa]]
[[Category: Large Structures]]
[[Category: Oligonucleotide/oligosaccharide-binding fold]]
[[Category: Pyrococcus horikoshii OT3]]
[[Category: Rna binding protein]]
[[Category: Gao YG]]
[[Category: Structural genomic]]
[[Category: Tanaka I]]
 
[[Category: Yao M]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Dec 31 20:22:14 2008''

Latest revision as of 13:49, 13 March 2024

The structure of protein from P. horikoshii at 1.7 angstrom resolution

2e8g, resolution 1.70Å

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