3d36: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(10 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:3d36.jpg|left|200px]]


<!--
==How to Switch Off a Histidine Kinase: Crystal Structure of Geobacillus stearothermophilus KinB with the Inhibitor Sda==
The line below this paragraph, containing "STRUCTURE_3d36", creates the "Structure Box" on the page.
<StructureSection load='3d36' size='340' side='right'caption='[[3d36]], [[Resolution|resolution]] 2.03&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3d36]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacillus_stearothermophilus_10 Geobacillus stearothermophilus 10]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3D36 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3D36 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.03&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene></td></tr>
{{STRUCTURE_3d36|  PDB=3d36  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3d36 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3d36 OCA], [https://pdbe.org/3d36 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3d36 RCSB], [https://www.ebi.ac.uk/pdbsum/3d36 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3d36 ProSAT]</span></td></tr>
 
</table>
===How to Switch Off a Histidine Kinase: Crystal Structure of Geobacillus stearothermophilus KinB with the Inhibitor Sda===
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
<!--
  <jmolCheckbox>
The line below this paragraph, {{ABSTRACT_PUBMED_19101565}}, adds the Publication Abstract to the page
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d3/3d36_consurf.spt"</scriptWhenChecked>
(as it appears on PubMed at http://www.pubmed.gov), where 19101565 is the PubMed ID number.
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-->
    <text>to colour the structure by Evolutionary Conservation</text>
{{ABSTRACT_PUBMED_19101565}}
  </jmolCheckbox>
 
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3d36 ConSurf].
==About this Structure==
<div style="clear:both"></div>
3D36 is a 3 chains structure of sequences from [http://en.wikipedia.org/wiki/Geobacillus_stearothermophilus Geobacillus stearothermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3D36 OCA].  
__TOC__
 
</StructureSection>
==Reference==
[[Category: Geobacillus stearothermophilus 10]]
How to Switch Off a Histidine Kinase: Crystal Structure of Geobacillus stearothermophilus KinB with the inhibitor Sda., Bick MJ, Lamour V, Rajashankar KR, Gordiyenko Y, Robinson CV, Darst SA, J Mol Biol. 2008 Dec 11. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/19101565 19101565]
[[Category: Large Structures]]
[[Category: Geobacillus stearothermophilus]]
[[Category: Bick MJ]]
[[Category: Histidine kinase]]
[[Category: Darst SA]]
[[Category: Bick, M J.]]
[[Category: Gordiyenko Y]]
[[Category: Darst, S A.]]
[[Category: Lamour V]]
[[Category: Gordiyenko, Y.]]
[[Category: Rajashankar KR]]
[[Category: Lamour, V.]]
[[Category: Robinson CV]]
[[Category: Rajashankar, K R.]]
[[Category: Robinson, C V.]]
[[Category: Class i two-component histidine kinase]]
[[Category: Four helix bundle]]
[[Category: Ghkl atpase]]
[[Category: Kinase]]
[[Category: Phosphoprotein]]
[[Category: Transferase]]
[[Category: Transferase/transferase inhibitor complex]]
[[Category: Two-component regulatory system]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 14 13:05:39 2009''

Latest revision as of 09:39, 21 February 2024

How to Switch Off a Histidine Kinase: Crystal Structure of Geobacillus stearothermophilus KinB with the Inhibitor Sda

3d36, resolution 2.03Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA