2dql: Difference between revisions

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{{Seed}}
[[Image:2dql.png|left|200px]]


<!--
==Crystal structure of the circadian clock associated protein Pex from anabaena==
The line below this paragraph, containing "STRUCTURE_2dql", creates the "Structure Box" on the page.
<StructureSection load='2dql' size='340' side='right'caption='[[2dql]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2dql]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Nostoc_sp._PCC_7120_=_FACHB-418 Nostoc sp. PCC 7120 = FACHB-418]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DQL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DQL FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
{{STRUCTURE_2dql|  PDB=2dql  |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dql FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dql OCA], [https://pdbe.org/2dql PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dql RCSB], [https://www.ebi.ac.uk/pdbsum/2dql PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dql ProSAT]</span></td></tr>
 
</table>
===Crytal structure of the circadian clock associated protein Pex from anabaena===
== Function ==
 
[https://www.uniprot.org/uniprot/Q8YQ56_NOSS1 Q8YQ56_NOSS1]  
 
== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_19032344}}, adds the Publication Abstract to the page
Check<jmol>
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  <jmolCheckbox>
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    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dq/2dql_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_19032344}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
2DQL is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Nostoc_sp._pcc_7120 Nostoc sp. pcc 7120]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DQL OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2dql ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
<ref group="xtra">PMID:19032344</ref><references group="xtra"/>
</StructureSection>
[[Category: Nostoc sp. pcc 7120]]
[[Category: Large Structures]]
[[Category: Kouyama, T.]]
[[Category: Nostoc sp. PCC 7120 = FACHB-418]]
[[Category: Kurosawa, T.]]
[[Category: Kouyama T]]
[[Category: Circadian clock associated protein]]
[[Category: Kurosawa S]]
[[Category: Circadian clock protein]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 21 09:13:36 2009''
Retrieved from "https://proteopedia.org/2dql"