2cbv: Difference between revisions

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New page: left|200px<br /> <applet load="2cbv" size="450" color="white" frame="true" align="right" spinBox="true" caption="2cbv, resolution 1.95Å" /> '''BETA-GLUCOSIDASE FR...
 
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[[Image:2cbv.gif|left|200px]]<br />
<applet load="2cbv" size="450" color="white" frame="true" align="right" spinBox="true"
caption="2cbv, resolution 1.95&Aring;" />
'''BETA-GLUCOSIDASE FROM THERMOTOGA MARITIMA IN COMPLEX WITH CALYSTEGINE B2'''<br />


==About this Structure==
==Beta-glucosidase from Thermotoga maritima in complex with calystegine B2==
2CBV is a [[http://en.wikipedia.org/wiki/Single_protein Single protein]] structure of sequence from [[http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]] with ACT and CGB as [[http://en.wikipedia.org/wiki/ligands ligands]]. Active as [[http://en.wikipedia.org/wiki/ ]], with EC number [[http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.21 3.2.1.21]]. Full crystallographic information is available from [[http://ispc.weizmann.ac.il/oca-bin/ocashort?id=2CBV OCA]].  
<StructureSection load='2cbv' size='340' side='right'caption='[[2cbv]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[2cbv]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CBV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CBV FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CGB:CALYSTEGINE+B2'>CGB</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2cbv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cbv OCA], [https://pdbe.org/2cbv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2cbv RCSB], [https://www.ebi.ac.uk/pdbsum/2cbv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2cbv ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/BGLA_THEMA BGLA_THEMA]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cb/2cbv_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2cbv ConSurf].
<div style="clear:both"></div>


==Reference==
==See Also==
Dissection of conformationally restricted inhibitors binding to a beta-glucosidase., Gloster TM, Madsen R, Davies GJ, Chembiochem. 2006 May;7(5):738-42. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=16628756 16628756]
*[[Beta-glucosidase 3D structures|Beta-glucosidase 3D structures]]
[[Category: Single protein]]
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Thermotoga maritima]]
[[Category: Thermotoga maritima]]
[[Category: Davies, G.J.]]
[[Category: Davies GJ]]
[[Category: Gloster, T.M.]]
[[Category: Gloster TM]]
[[Category: Madsen, R.]]
[[Category: Madsen R]]
[[Category: ACT]]
[[Category: CGB]]
[[Category: carbohydrate metabolism]]
[[Category: cellulose degradation]]
[[Category: family 1]]
[[Category: glycosidase]]
[[Category: glycoside hydrolase]]
[[Category: hydrolase]]
[[Category: inhibitor]]
[[Category: polysaccharide degradation]]
[[Category: transition state mimic]]
 
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Mon Oct 29 21:25:39 2007''

Latest revision as of 14:12, 13 December 2023

Beta-glucosidase from Thermotoga maritima in complex with calystegine B2

2cbv, resolution 1.95Å

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