3fnd: Difference between revisions

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{{Seed}}
[[Image:3fnd.jpg|left|200px]]


<!--
==Crystal structure of a chitinase from Bacteroides thetaiotaomicron==
The line below this paragraph, containing "STRUCTURE_3fnd", creates the "Structure Box" on the page.
<StructureSection load='3fnd' size='340' side='right'caption='[[3fnd]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FND OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FND FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_3fnd|  PDB=3fnd |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fnd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fnd OCA], [https://pdbe.org/3fnd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fnd RCSB], [https://www.ebi.ac.uk/pdbsum/3fnd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fnd ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3fnd TOPSAN]</span></td></tr>
</table>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fn/3fnd_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3fnd ConSurf].
<div style="clear:both"></div>


===Crystal structure of a chitinase from Bacteroides thetaiotaomicron===
==See Also==
 
*[[Chitinase 3D structures|Chitinase 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
3FND is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Bacteroides_thetaiotaomicron Bacteroides thetaiotaomicron]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FND OCA].
[[Category: Large Structures]]
[[Category: Bacteroides thetaiotaomicron]]
[[Category: Burley SK]]
[[Category: Burley, S K.]]
[[Category: Damodharan L]]
[[Category: Damodharan, L.]]
[[Category: Swaminathan S]]
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
[[Category: Swaminathan, S.]]
[[Category: 11092m]]
[[Category: Chitinase]]
[[Category: Glycosidase]]
[[Category: Hydrolase]]
[[Category: New york sgx research center for structural genomic]]
[[Category: Nysgxrc]]
[[Category: Protein structure initiative]]
[[Category: Psi-2]]
[[Category: Structural genomic]]
[[Category: Tim-barrel]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 11 12:43:57 2009''
Retrieved from "https://proteopedia.org/3fnd"