1x25: Difference between revisions

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~~[[Image:1x25.gif|left|200px]]<br /><applet load="1x25" size="450" color="white" frame="true" align="right" spinBox="true"~~

~~caption="1x25, resolution 2.00Å" />~~

~~'''Crystal Structure of a Member of YjgF Family from Sulfolobus Tokodaii (ST0811)'''<br />~~

==~~About this~~ Structure==

==Crystal Structure of a Member of YjgF Family from Sulfolobus Tokodaii (ST0811)==

~~1X25 is a~~ [~~http://en~~.~~wikipedia.org/wiki/Single_protein Single protein~~] structure of sequence from [~~http~~://en.wikipedia.org/wiki/~~Sulfolobus_tokodaii Sulfolobus~~ tokodaii]. Full crystallographic information is available from [http://~~ispc~~.weizmann.ac.il/oca-bin/ocashort?id=1X25 OCA].

== Structural highlights ==

==~~Reference~~==

<table><tr><td colspan='2'>[[1x25]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Sulfurisphaera_tokodaii_str._7 Sulfurisphaera tokodaii str. 7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1X25 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1X25 FirstGlance]. <br>

~~Crystal structure of the YjgF~~/~~YER057c~~/~~UK114 family protein from the hyperthermophilic archaeon Sulfolobus tokodaii strain 7~~., ~~Miyakawa T, Lee WC, Hatano K, Kato Y, Sawano Y, Miyazono K, Nagata K, Tanokura M, Proteins. 2006 Feb 1;62(2):557-61. PMID:~~[http://~~ispc~~.weizmann.ac.il//~~pmbin~~/~~getpm~~?~~pmid~~=~~16323205 16323205~~]

</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2Å</td></tr>

[[~~Category~~: ~~Single protein]~~]

<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1x25 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1x25 OCA], [https://pdbe.org/1x25 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1x25 RCSB], [https://www.ebi.ac.uk/pdbsum/1x25 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1x25 ProSAT]</span></td></tr>

[~~[Category~~: ~~Sulfolobus tokodaii]~~]

</table>

[[~~Category~~: ~~Hatano, K~~.]]

== Function ==

[~~[Category~~: ~~Kato, Y~~.]]

[https://www.uniprot.org/uniprot/Y811_SULTO Y811_SULTO]

[~~[Category~~: ~~Lee, W~~.C.]]

== Evolutionary Conservation ==

[[Category: ~~Miyakawa, T.~~]]

[[Image:Consurf_key_small.gif|200px|right]]

[[Category: ~~Miyazono, K~~.]]

Check<jmol>

[[Category: ~~Nagata,~~ K.]]

[[Category: ~~Sawano,~~ Y.]]

<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/x2/1x25_consurf.spt"</scriptWhenChecked>

[[Category: ~~Tanokura, M.~~]]

<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>

[[Category: ~~archaea~~]]

<text>to colour the structure by Evolutionary Conservation</text>

[[Category: ~~st0811~~]]

</jmolCheckbox>

[[Category: ~~structural genomics~~]]

</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1x25 ConSurf].

[[Category: ~~yjgf-like protein~~]]

__TOC__

~~''Page seeded by~~ [~~http~~:~~//ispc.weizmann.ac.il/oca OCA~~ ] ~~on Wed Nov 21 05:48:08 2007''~~

</StructureSection>

[[Category: Large Structures]]

[[Category: Sulfurisphaera tokodaii str. 7]]

[[Category: Hatano K]]

[[Category: Kato Y]]

[[Category: Lee WC]]

[[Category: Miyakawa T]]

[[Category: Miyazono K]]

[[Category: Nagata K]]

[[Category: Sawano Y]]

[[Category: Tanokura M]]

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@@ Line 1: / Line 1: @@
-[[Image:1x25.gif|left|200px]]<br /><applet load="1x25" size="450" color="white" frame="true" align="right" spinBox="true"
-caption="1x25, resolution 2.00&Aring;" />
-'''Crystal Structure of a Member of YjgF Family from Sulfolobus Tokodaii (ST0811)'''<br />
-==About this Structure==
+==Crystal Structure of a Member of YjgF Family from Sulfolobus Tokodaii (ST0811)==
-X25 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Sulfolobus_tokodaii Sulfolobus tokodaii]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1X25 OCA].
+<StructureSection load='1x25' size='340' side='right'caption='[[1x25]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
+== Structural highlights ==
-==Reference==
+<table><tr><td colspan='2'>[[1x25]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Sulfurisphaera_tokodaii_str._7 Sulfurisphaera tokodaii str. 7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1X25 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1X25 FirstGlance]. <br>
-Crystal structure of the YjgF/YER057c/UK114 family protein from the hyperthermophilic archaeon Sulfolobus tokodaii strain 7., Miyakawa T, Lee WC, Hatano K, Kato Y, Sawano Y, Miyazono K, Nagata K, Tanokura M, Proteins. 2006 Feb 1;62(2):557-61. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=16323205 16323205]
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-[[Category: Single protein]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1x25 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1x25 OCA], [https://pdbe.org/1x25 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1x25 RCSB], [https://www.ebi.ac.uk/pdbsum/1x25 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1x25 ProSAT]</span></td></tr>
-[[Category: Sulfolobus tokodaii]]
+</table>
-[[Category: Hatano, K.]]
+== Function ==
-[[Category: Kato, Y.]]
+[https://www.uniprot.org/uniprot/Y811_SULTO Y811_SULTO]
-[[Category: Lee, W.C.]]
+== Evolutionary Conservation ==
-[[Category: Miyakawa, T.]]
+[[Image:Consurf_key_small.gif|200px|right]]
-[[Category: Miyazono, K.]]
+Check<jmol>
-[[Category: Nagata, K.]]
+  <jmolCheckbox>
-[[Category: Sawano, Y.]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/x2/1x25_consurf.spt"</scriptWhenChecked>
-[[Category: Tanokura, M.]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-[[Category: archaea]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: st0811]]
+  </jmolCheckbox>
-[[Category: structural genomics]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1x25 ConSurf].
-[[Category: yjgf-like protein]]
+<div style="clear:both"></div>
+__TOC__
-''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 05:48:08 2007''
+</StructureSection>
+[[Category: Large Structures]]
+[[Category: Sulfurisphaera tokodaii str. 7]]
+[[Category: Hatano K]]
+[[Category: Kato Y]]
+[[Category: Lee WC]]
+[[Category: Miyakawa T]]
+[[Category: Miyazono K]]
+[[Category: Nagata K]]
+[[Category: Sawano Y]]
+[[Category: Tanokura M]]