1x3p: Difference between revisions
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New page: left|200px<br /><applet load="1x3p" size="450" color="white" frame="true" align="right" spinBox="true" caption="1x3p" /> '''3D solution structure of the Chromo-3 domain... |
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== | ==3D solution structure of the Chromo-3 domain of cpSRP43== | ||
<StructureSection load='1x3p' size='340' side='right'caption='[[1x3p]]' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[1x3p]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1X3P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1X3P FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1x3p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1x3p OCA], [https://pdbe.org/1x3p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1x3p RCSB], [https://www.ebi.ac.uk/pdbsum/1x3p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1x3p ProSAT]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/SR43C_ARATH SR43C_ARATH] Component of the chloroplast signal recognition particle pathway. Required for post-translational targeting of proteins into the tylakoid membrane but seems to be dispensable for co-translational targeting with a translating ribosome present. May be able to function independently of cpFTSY and FFC/cpSRP54 in targeting LHCPs to the thylakoids. Acts as a highly specific chaperone for LHCPs, preventing aggregation and being able to dissolve aggregates.<ref>PMID:9878634</ref> <ref>PMID:10480939</ref> <ref>PMID:15292240</ref> <ref>PMID:17513500</ref> <ref>PMID:20498370</ref> | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/x3/1x3p_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1x3p ConSurf]. | |||
<div style="clear:both"></div> | |||
== References == | |||
<references/> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Arabidopsis thaliana]] | [[Category: Arabidopsis thaliana]] | ||
[[Category: | [[Category: Large Structures]] | ||
[[Category: Henry | [[Category: Henry R]] | ||
[[Category: Kumar | [[Category: Kumar TKS]] | ||
[[Category: Leena | [[Category: Leena PST]] | ||
[[Category: Sivaraja | [[Category: Sivaraja V]] | ||
[[Category: Yu | [[Category: Yu C]] | ||
Latest revision as of 13:57, 9 May 2024
3D solution structure of the Chromo-3 domain of cpSRP43
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