3b50: Difference between revisions

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{{Seed}}
[[Image:3b50.png|left|200px]]


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==Structure of H. influenzae sialic acid binding protein bound to Neu5Ac.==
The line below this paragraph, containing "STRUCTURE_3b50", creates the "Structure Box" on the page.
<StructureSection load='3b50' size='340' side='right'caption='[[3b50]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3b50]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Haemophilus_influenzae Haemophilus influenzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3B50 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3B50 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.4&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SLB:5-N-ACETYL-BETA-D-NEURAMINIC+ACID'>SLB</scene></td></tr>
{{STRUCTURE_3b50|  PDB=3b50  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3b50 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3b50 OCA], [https://pdbe.org/3b50 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3b50 RCSB], [https://www.ebi.ac.uk/pdbsum/3b50 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3b50 ProSAT]</span></td></tr>
 
</table>
===Structure of H. influenzae sialic acid binding protein bound to Neu5Ac.===
== Function ==
 
[https://www.uniprot.org/uniprot/SIAP_HAEIN SIAP_HAEIN] Part of the tripartite ATP-independent periplasmic (TRAP) transport system SiaPT involved in the uptake of sialic acid. This protein specifically binds sialic acid with high affinity.
 
== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/b5/3b50_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_17947229}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
3B50 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Haemophilus_influenzae Haemophilus influenzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3B50 OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3b50 ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
<ref group="xtra">PMID:17947229</ref><references group="xtra"/>
</StructureSection>
[[Category: Haemophilus influenzae]]
[[Category: Haemophilus influenzae]]
[[Category: Apicella, M A.]]
[[Category: Large Structures]]
[[Category: Coussens, N P.]]
[[Category: Apicella MA]]
[[Category: Johnston, J W.]]
[[Category: Coussens NP]]
[[Category: Ramaswamy, S.]]
[[Category: Johnston JW]]
[[Category: Periplasmic binding protein]]
[[Category: Ramaswamy S]]
[[Category: Sugar transport]]
[[Category: Transport]]
[[Category: Transport protein]]
[[Category: Trap]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 11:24:32 2009''
Retrieved from "https://proteopedia.org/3b50"