3b9y: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(12 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:3b9y.png|left|200px]]


<!--
==Crystal structure of the Nitrosomonas europaea Rh protein==
The line below this paragraph, containing "STRUCTURE_3b9y", creates the "Structure Box" on the page.
<StructureSection load='3b9y' size='340' side='right'caption='[[3b9y]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3b9y]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Nitrosomonas_europaea_ATCC_19718 Nitrosomonas europaea ATCC 19718]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3B9Y OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3B9Y FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BOG:B-OCTYLGLUCOSIDE'>BOG</scene>, <scene name='pdbligand=UNL:UNKNOWN+LIGAND'>UNL</scene></td></tr>
{{STRUCTURE_3b9y|  PDB=3b9y |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3b9y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3b9y OCA], [https://pdbe.org/3b9y PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3b9y RCSB], [https://www.ebi.ac.uk/pdbsum/3b9y PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3b9y ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q82X47_NITEU Q82X47_NITEU]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/b9/3b9y_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3b9y ConSurf].
<div style="clear:both"></div>


===Crystal structure of the Nitrosomonas europaea Rh protein===
==See Also==
 
*[[Ion channels 3D structures|Ion channels 3D structures]]
 
__TOC__
<!--
</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_18040042}}, adds the Publication Abstract to the page
[[Category: Large Structures]]
(as it appears on PubMed at http://www.pubmed.gov), where 18040042 is the PubMed ID number.
[[Category: Nitrosomonas europaea ATCC 19718]]
-->
[[Category: Chan MK]]
{{ABSTRACT_PUBMED_18040042}}
[[Category: Jayachandran S]]
 
[[Category: Li X]]
==About this Structure==
[[Category: Nguyen H-HT]]
3B9Y is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Nitrosomonas_europaea_atcc_19718 Nitrosomonas europaea atcc 19718]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3B9Y OCA].
 
==Reference==
<ref group="xtra">PMID:18040042</ref><references group="xtra"/>
[[Category: Nitrosomonas europaea atcc 19718]]
[[Category: Chan, M K.]]
[[Category: Jayachandran, S.]]
[[Category: Li, X.]]
[[Category: Nguyen, H-H T.]]
[[Category: Carbon dioxide]]
[[Category: Channel]]
[[Category: Co2]]
[[Category: Rh protein]]
[[Category: Transport protein]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 11:31:20 2009''