2qhs: Difference between revisions

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{{Seed}}
[[Image:2qhs.png|left|200px]]


<!--
==Structural Basis of Octanoic Acid Recognition by Lipoate-Protein Ligase B==
The line below this paragraph, containing "STRUCTURE_2qhs", creates the "Structure Box" on the page.
<StructureSection load='2qhs' size='340' side='right'caption='[[2qhs]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2qhs]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QHS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QHS FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=OCA:OCTANOIC+ACID+(CAPRYLIC+ACID)'>OCA</scene></td></tr>
{{STRUCTURE_2qhs|  PDB=2qhs  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qhs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qhs OCA], [https://pdbe.org/2qhs PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qhs RCSB], [https://www.ebi.ac.uk/pdbsum/2qhs PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qhs ProSAT]</span></td></tr>
 
</table>
===Structural Basis of Octanoic Acid Recognition by Lipoate-Protein Ligase B===
== Function ==
 
[https://www.uniprot.org/uniprot/LIPB_THET8 LIPB_THET8] Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate (By similarity).
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
2QHS is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QHS OCA].  
Check<jmol>
 
  <jmolCheckbox>
==Reference==
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qh/2qhs_consurf.spt"</scriptWhenChecked>
<ref group="xtra">PMID:18076036</ref><references group="xtra"/>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Thermus thermophilus]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Kim, D J.]]
  </jmolCheckbox>
[[Category: Kim, H S.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qhs ConSurf].
[[Category: Kim, K H.]]
<div style="clear:both"></div>
[[Category: Lee, H H.]]
__TOC__
[[Category: Lee, S J.]]
</StructureSection>
[[Category: Suh, S W.]]
[[Category: Large Structures]]
[[Category: Yoon, H J.]]
[[Category: Thermus thermophilus HB8]]
[[Category: Globular protein]]
[[Category: Kim DJ]]
[[Category: Transferase]]
[[Category: Kim HS]]
 
[[Category: Kim KH]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 12:02:02 2009''
[[Category: Lee HH]]
[[Category: Lee SJ]]
[[Category: Suh SW]]
[[Category: Yoon HJ]]
Retrieved from "https://proteopedia.org/2qhs"