1eu8: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(9 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:1eu8.png|left|200px]]


<!--
==STRUCTURE OF TREHALOSE MALTOSE BINDING PROTEIN FROM THERMOCOCCUS LITORALIS==
The line below this paragraph, containing "STRUCTURE_1eu8", creates the "Structure Box" on the page.
<StructureSection load='1eu8' size='340' side='right'caption='[[1eu8]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1eu8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermococcus_litoralis Thermococcus litoralis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EU8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1EU8 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=PRD_900006:trehalose'>PRD_900006</scene>, <scene name='pdbligand=PT:PLATINUM+(II)+ION'>PT</scene></td></tr>
{{STRUCTURE_1eu8|  PDB=1eu8  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1eu8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1eu8 OCA], [https://pdbe.org/1eu8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1eu8 RCSB], [https://www.ebi.ac.uk/pdbsum/1eu8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1eu8 ProSAT]</span></td></tr>
 
</table>
===STRUCTURE OF TREHALOSE MALTOSE BINDING PROTEIN FROM THERMOCOCCUS LITORALIS===
== Function ==
 
[https://www.uniprot.org/uniprot/MALE_THELN MALE_THELN] Part of the ABC transporter complex MalEFGK involved in trehalose/maltose import. Binds maltose and trehalose.<ref>PMID:11453995</ref> <ref>PMID:16532450</ref> <ref>PMID:8759837</ref> <ref>PMID:9457875</ref>
 
== Evolutionary Conservation ==
<!--
[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_11162101}}, adds the Publication Abstract to the page
Check<jmol>
(as it appears on PubMed at http://www.pubmed.gov), where 11162101 is the PubMed ID number.
  <jmolCheckbox>
-->
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/eu/1eu8_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_11162101}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
1EU8 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Thermococcus_litoralis Thermococcus litoralis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EU8 OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1eu8 ConSurf].
 
<div style="clear:both"></div>
==Reference==
== References ==
<ref group="xtra">PMID:11162101</ref><references group="xtra"/>
<references/>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Thermococcus litoralis]]
[[Category: Thermococcus litoralis]]
[[Category: Boos, W.]]
[[Category: Boos W]]
[[Category: Diederichs, K.]]
[[Category: Diederichs K]]
[[Category: Diez, J.]]
[[Category: Diez J]]
[[Category: Greller, G.]]
[[Category: Greller G]]
[[Category: Horlacher, R.]]
[[Category: Horlacher R]]
[[Category: Welte, W.]]
[[Category: Welte W]]
[[Category: Abc transporter fold]]
[[Category: Mbp 2 fold]]
[[Category: Protein-carbohydrate complex]]
[[Category: Thermophilic protein]]
[[Category: Trehalose-maltose binding protein]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 12:40:41 2009''