1xw8: Difference between revisions
From Proteopedia
Jump to navigationJump to search
New page: left|200px<br /><applet load="1xw8" size="450" color="white" frame="true" align="right" spinBox="true" caption="1xw8, resolution 2.00Å" /> '''X-ray structure of p... |
No edit summary |
||
| (15 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
== | ==X-ray structure of putative lactam utilization protein YBGL. Northeast Structural Genomics Consortium target ET90.== | ||
<StructureSection load='1xw8' size='340' side='right'caption='[[1xw8]], [[Resolution|resolution]] 2.00Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[1xw8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XW8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1XW8 FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2Å</td></tr> | |||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1xw8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xw8 OCA], [https://pdbe.org/1xw8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1xw8 RCSB], [https://www.ebi.ac.uk/pdbsum/1xw8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1xw8 ProSAT], [https://www.topsan.org/Proteins/NESGC/1xw8 TOPSAN]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/PXPA_ECOLI PXPA_ECOLI] Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.[HAMAP-Rule:MF_00691]<ref>PMID:28830929</ref> | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xw/1xw8_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1xw8 ConSurf]. | |||
<div style="clear:both"></div> | |||
== References == | |||
<references/> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Escherichia coli]] | [[Category: Escherichia coli]] | ||
[[Category: | [[Category: Large Structures]] | ||
[[Category: Acton | [[Category: Acton TB]] | ||
[[Category: Chen | [[Category: Chen Y]] | ||
[[Category: Hunt | [[Category: Hunt JF]] | ||
[[Category: Kuzin | [[Category: Kuzin AP]] | ||
[[Category: Ma | [[Category: Ma L-C]] | ||
[[Category: Montelione | [[Category: Montelione GT]] | ||
[[Category: Tong L]] | |||
[[Category: Tong | [[Category: Vorobiev SM]] | ||
[[Category: Vorobiev | [[Category: Xiao R]] | ||
[[Category: Xiao | |||
Latest revision as of 08:56, 6 November 2024
X-ray structure of putative lactam utilization protein YBGL. Northeast Structural Genomics Consortium target ET90.
| ||||||||||||
