2vuv: Difference between revisions

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{{Seed}}
[[Image:2vuv.png|left|200px]]


<!--
==Crystal structure of Codakine at 1.3A resolution==
The line below this paragraph, containing "STRUCTURE_2vuv", creates the "Structure Box" on the page.
<StructureSection load='2vuv' size='340' side='right'caption='[[2vuv]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2vuv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Codakia_orbicularis Codakia orbicularis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VUV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VUV FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.3&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=HYP:4-HYDROXYPROLINE'>HYP</scene></td></tr>
{{STRUCTURE_2vuv|  PDB=2vuv  |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2vuv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vuv OCA], [https://pdbe.org/2vuv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2vuv RCSB], [https://www.ebi.ac.uk/pdbsum/2vuv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2vuv ProSAT]</span></td></tr>
 
</table>
===CRYSTAL STRUCTURE OF CODAKINE AT 1.3A RESOLUTION===
== Function ==
 
[https://www.uniprot.org/uniprot/Q3KVL7_9BIVA Q3KVL7_9BIVA]
 
== Evolutionary Conservation ==
<!--
[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_18687680}}, adds the Publication Abstract to the page
Check<jmol>
(as it appears on PubMed at http://www.pubmed.gov), where 18687680 is the PubMed ID number.
  <jmolCheckbox>
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    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vu/2vuv_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_18687680}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
2VUV is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Codakia_orbicularis Codakia orbicularis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VUV OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2vuv ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
<ref group="xtra">PMID:18687680</ref><references group="xtra"/>
</StructureSection>
[[Category: Codakia orbicularis]]
[[Category: Codakia orbicularis]]
[[Category: Cioci, G C.]]
[[Category: Large Structures]]
[[Category: Gauthier, C.]]
[[Category: Cioci GC]]
[[Category: Gourdine, J P.]]
[[Category: Gauthier C]]
[[Category: Imberty, A.]]
[[Category: Gourdine JP]]
[[Category: Miguet, L.]]
[[Category: Imberty A]]
[[Category: Smith-Ravin, E J.]]
[[Category: Miguet L]]
[[Category: Unverzagt, C.]]
[[Category: Smith-Ravin EJ]]
[[Category: Varrot, A.]]
[[Category: Unverzagt C]]
[[Category: C-type]]
[[Category: Varrot A]]
[[Category: Codakine]]
[[Category: Invertebrate]]
[[Category: Lectin]]
[[Category: Mannose]]
[[Category: Sugar-binding protein]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 15:03:13 2009''
Retrieved from "https://proteopedia.org/2vuv"