1yqd: Difference between revisions

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{{Seed}}
[[Image:1yqd.png|left|200px]]


<!--
==Sinapyl Alcohol Dehydrogenase complexed with NADP+==
The line below this paragraph, containing "STRUCTURE_1yqd", creates the "Structure Box" on the page.
<StructureSection load='1yqd' size='340' side='right'caption='[[1yqd]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1yqd]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Populus_tremuloides Populus tremuloides]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YQD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YQD FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.65&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DTT:2,3-DIHYDROXY-1,4-DITHIOBUTANE'>DTT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NAP:NADP+NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NAP</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
{{STRUCTURE_1yqd|  PDB=1yqd |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yqd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yqd OCA], [https://pdbe.org/1yqd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yqd RCSB], [https://www.ebi.ac.uk/pdbsum/1yqd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yqd ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q94G59_POPTM Q94G59_POPTM]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yq/1yqd_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1yqd ConSurf].
<div style="clear:both"></div>


===Sinapyl Alcohol Dehydrogenase complexed with NADP+===
==See Also==
 
*[[Alcohol dehydrogenase 3D structures|Alcohol dehydrogenase 3D structures]]
 
__TOC__
<!--
</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_15829607}}, adds the Publication Abstract to the page
[[Category: Large Structures]]
(as it appears on PubMed at http://www.pubmed.gov), where 15829607 is the PubMed ID number.
-->
{{ABSTRACT_PUBMED_15829607}}
 
==About this Structure==
1YQD is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Populus_tremuloides Populus tremuloides]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YQD OCA].
 
==Reference==
<ref group="xtra">PMID:15829607</ref><references group="xtra"/>
[[Category: Cinnamyl-alcohol dehydrogenase]]
[[Category: Populus tremuloides]]
[[Category: Populus tremuloides]]
[[Category: Bomati, E K.]]
[[Category: Bomati EK]]
[[Category: Noel, J P.]]
[[Category: Noel JP]]
[[Category: Biosynthesis]]
[[Category: Lignin]]
[[Category: Medium-chain dehydrogense/reductase]]
[[Category: Monolignol]]
[[Category: Oxidoreductase]]
[[Category: Plant defense]]
[[Category: Substrate inhibition]]
[[Category: Zinc-dependent]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 16:21:15 2009''

Latest revision as of 08:59, 14 February 2024

Sinapyl Alcohol Dehydrogenase complexed with NADP+

1yqd, resolution 1.65Å

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