1x3n: Difference between revisions

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{{Seed}}
[[Image:1x3n.png|left|200px]]


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==Crystal structure of AMPPNP bound Propionate kinase (TdcD) from Salmonella typhimurium==
The line below this paragraph, containing "STRUCTURE_1x3n", creates the "Structure Box" on the page.
<StructureSection load='1x3n' size='340' side='right'caption='[[1x3n]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1x3n]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhimurium Salmonella enterica subsp. enterica serovar Typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1X3N OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1X3N FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ANP:PHOSPHOAMINOPHOSPHONIC+ACID-ADENYLATE+ESTER'>ANP</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>
{{STRUCTURE_1x3n|  PDB=1x3n  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1x3n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1x3n OCA], [https://pdbe.org/1x3n PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1x3n RCSB], [https://www.ebi.ac.uk/pdbsum/1x3n PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1x3n ProSAT]</span></td></tr>
 
</table>
===Crystal structure of AMPPNP bound Propionate kinase (TdcD) from Salmonella typhimurium===
== Function ==
 
[https://www.uniprot.org/uniprot/TDCD_SALTY TDCD_SALTY] Catalyzes the conversion of propionyl phosphate and ADP to propionate and ATP. It can also use acetyl phosphate as phosphate group acceptor.[HAMAP-Rule:MF_01881]
 
== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_16139298}}, adds the Publication Abstract to the page
Check<jmol>
(as it appears on PubMed at http://www.pubmed.gov), where 16139298 is the PubMed ID number.
  <jmolCheckbox>
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    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/x3/1x3n_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_16139298}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
1X3N is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Salmonella_typhimurium Salmonella typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1X3N OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1x3n ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
<ref group="xtra">PMID:16139298</ref><references group="xtra"/>
</StructureSection>
[[Category: Salmonella typhimurium]]
[[Category: Large Structures]]
[[Category: Murthy, M R.]]
[[Category: Salmonella enterica subsp. enterica serovar Typhimurium]]
[[Category: Savithri, H S.]]
[[Category: Murthy MR]]
[[Category: Simanshu, D K.]]
[[Category: Savithri HS]]
[[Category: Amppnp]]
[[Category: Simanshu DK]]
[[Category: L-threonine metabolism]]
[[Category: Propionate kinase]]
[[Category: Propionate metabolism]]
[[Category: Tdcd]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 17:14:17 2009''
Retrieved from "https://proteopedia.org/1x3n"