1opf: Difference between revisions

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{{Seed}}
[[Image:1opf.png|left|200px]]


<!--
==THE STRUCTURE OF OMPF PORIN IN A TETRAGONAL CRYSTAL FORM==
The line below this paragraph, containing "STRUCTURE_1opf", creates the "Structure Box" on the page.
<StructureSection load='1opf' size='340' side='right'caption='[[1opf]], [[Resolution|resolution]] 3.20&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1opf]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OPF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1OPF FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.2&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1opf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1opf OCA], [https://pdbe.org/1opf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1opf RCSB], [https://www.ebi.ac.uk/pdbsum/1opf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1opf ProSAT]</span></td></tr>
{{STRUCTURE_1opf| PDB=1opf |  SCENE= }}
</table>
== Function ==
[https://www.uniprot.org/uniprot/OMPF_ECOLI OMPF_ECOLI] Forms pores that allow passive diffusion of small molecules across the outer membrane. It is also a receptor for the bacteriophage T2.<ref>PMID:19721064</ref>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/op/1opf_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1opf ConSurf].
<div style="clear:both"></div>


===THE STRUCTURE OF OMPF PORIN IN A TETRAGONAL CRYSTAL FORM===
==See Also==
 
*[[Porin 3D structures|Porin 3D structures]]
 
== References ==
<!--
<references/>
The line below this paragraph, {{ABSTRACT_PUBMED_8589999}}, adds the Publication Abstract to the page
__TOC__
(as it appears on PubMed at http://www.pubmed.gov), where 8589999 is the PubMed ID number.
</StructureSection>
-->
{{ABSTRACT_PUBMED_8589999}}
 
==About this Structure==
1OPF is a 6 chains structure of sequences from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OPF OCA].
 
==Reference==
<ref group="xtra">PMID:8589999</ref><references group="xtra"/>
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
[[Category: Cowan, S W.]]
[[Category: Large Structures]]
[[Category: Jansonius, J N.]]
[[Category: Cowan SW]]
[[Category: Pauptit, R A.]]
[[Category: Jansonius JN]]
[[Category: Schirmer, T.]]
[[Category: Pauptit RA]]
[[Category: Membrane protein]]
[[Category: Schirmer T]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 19:42:38 2009''
Retrieved from "https://proteopedia.org/1opf"