2nad: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,330,058 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,330,058 edits
No edit summary
 
(10 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:2nad.png|left|200px]]


<!--
==HIGH RESOLUTION STRUCTURES OF HOLO AND APO FORMATE DEHYDROGENASE==
The line below this paragraph, containing "STRUCTURE_2nad", creates the "Structure Box" on the page.
<StructureSection load='2nad' size='340' side='right'caption='[[2nad]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2nad]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_sp._101 Pseudomonas sp. 101]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NAD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2NAD FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AZI:AZIDE+ION'>AZI</scene>, <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
{{STRUCTURE_2nad|  PDB=2nad |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2nad FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2nad OCA], [https://pdbe.org/2nad PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2nad RCSB], [https://www.ebi.ac.uk/pdbsum/2nad PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2nad ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/FDH_PSESR FDH_PSESR]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/na/2nad_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2nad ConSurf].
<div style="clear:both"></div>


===HIGH RESOLUTION STRUCTURES OF HOLO AND APO FORMATE DEHYDROGENASE===
==See Also==
 
*[[Aldehyde dehydrogenase 3D structures|Aldehyde dehydrogenase 3D structures]]
 
*[[Formate dehydrogenase|Formate dehydrogenase]]
<!--
*[[Formate dehydrogenase 3D structures|Formate dehydrogenase 3D structures]]
The line below this paragraph, {{ABSTRACT_PUBMED_8114093}}, adds the Publication Abstract to the page
__TOC__
(as it appears on PubMed at http://www.pubmed.gov), where 8114093 is the PubMed ID number.
</StructureSection>
-->
[[Category: Large Structures]]
{{ABSTRACT_PUBMED_8114093}}
[[Category: Pseudomonas sp. 101]]
 
[[Category: Dauter Z]]
==About this Structure==
[[Category: Harutyunyan EH]]
2NAD is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Pseudomonas_sp. Pseudomonas sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NAD OCA].
[[Category: Lamzin VS]]
 
[[Category: Popov VO]]
==Reference==
[[Category: Wilson KS]]
<ref group="xtra">PMID:8114093</ref><references group="xtra"/>
[[Category: Formate dehydrogenase]]
[[Category: Pseudomonas sp.]]
[[Category: Dauter, Z.]]
[[Category: Harutyunyan, E H.]]
[[Category: Lamzin, V S.]]
[[Category: Popov, V O.]]
[[Category: Wilson, K S.]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 19:56:16 2009''
Retrieved from "https://proteopedia.org/2nad"