2v1r: Difference between revisions

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{{Seed}}
[[Image:2v1r.png|left|200px]]


<!--
==Yeast Pex13 SH3 domain complexed with a peptide from Pex14 at 2.1 A resolution==
The line below this paragraph, containing "STRUCTURE_2v1r", creates the "Structure Box" on the page.
<StructureSection load='2v1r' size='340' side='right'caption='[[2v1r]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2v1r]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V1R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2V1R FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene></td></tr>
{{STRUCTURE_2v1r|  PDB=2v1r |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2v1r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2v1r OCA], [https://pdbe.org/2v1r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2v1r RCSB], [https://www.ebi.ac.uk/pdbsum/2v1r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2v1r ProSAT]</span></td></tr>
 
</table>
===YEAST PEX13 SH3 DOMAIN COMPLEXED WITH A PEPTIDE FROM PEX14 AT 2.1 A RESOLUTION===
== Function ==
 
[https://www.uniprot.org/uniprot/PEX13_YEAST PEX13_YEAST] Component of the peroxisomal translocation machinery with PEX14 and PEX17. Interacts with the PTS1 receptor (PAS10/PEX5).
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
2V1R is a 5 chains structure of sequences from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V1R OCA].  
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/v1/2v1r_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2v1r ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Saccharomyces cerevisiae]]
[[Category: Saccharomyces cerevisiae]]
[[Category: Kursula, I.]]
[[Category: Kursula I]]
[[Category: Kursula, P.]]
[[Category: Kursula P]]
[[Category: Lehmann, F.]]
[[Category: Lehmann F]]
[[Category: Song, Y H.]]
[[Category: Song YH]]
[[Category: Wilmanns, M.]]
[[Category: Wilmanns M]]
[[Category: Zou, P.]]
[[Category: Zou P]]
[[Category: Membrane]]
[[Category: Peptide complex]]
[[Category: Peroxisome]]
[[Category: Protein transport]]
[[Category: Sh3 domain]]
[[Category: Structural genomic]]
[[Category: Translocation]]
[[Category: Transmembrane]]
[[Category: Transport]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 00:38:35 2009''
Retrieved from "https://proteopedia.org/2v1r"