1yht: Difference between revisions

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{{Seed}}
[[Image:1yht.png|left|200px]]


<!--
==Crystal structure analysis of Dispersin B==
The line below this paragraph, containing "STRUCTURE_1yht", creates the "Structure Box" on the page.
<StructureSection load='1yht' size='340' side='right'caption='[[1yht]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1yht]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aggregatibacter_actinomycetemcomitans Aggregatibacter actinomycetemcomitans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YHT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YHT FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
{{STRUCTURE_1yht|  PDB=1yht  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yht FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yht OCA], [https://pdbe.org/1yht PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yht RCSB], [https://www.ebi.ac.uk/pdbsum/1yht PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yht ProSAT]</span></td></tr>
 
</table>
===Crystal structure analysis of Dispersin B===
== Function ==
 
[https://www.uniprot.org/uniprot/Q840G9_AGGAC Q840G9_AGGAC]
 
== Evolutionary Conservation ==
<!--
[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_15878175}}, adds the Publication Abstract to the page
Check<jmol>
(as it appears on PubMed at http://www.pubmed.gov), where 15878175 is the PubMed ID number.
  <jmolCheckbox>
-->
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yh/1yht_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_15878175}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
1YHT is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Aggregatibacter_actinomycetemcomitans Aggregatibacter actinomycetemcomitans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YHT OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1yht ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
<ref group="xtra">PMID:15878175</ref><ref group="xtra">PMID:12896987</ref><ref group="xtra">PMID:15215120</ref><ref group="xtra">PMID:15576769</ref><references group="xtra"/>
</StructureSection>
[[Category: Aggregatibacter actinomycetemcomitans]]
[[Category: Aggregatibacter actinomycetemcomitans]]
[[Category: Beta-N-acetylhexosaminidase]]
[[Category: Large Structures]]
[[Category: Kaplan, J B.]]
[[Category: Kaplan JB]]
[[Category: Ragunath, C.]]
[[Category: Ragunath C]]
[[Category: Ramasubbu, N.]]
[[Category: Ramasubbu N]]
[[Category: Thomas, L M.]]
[[Category: Thomas LM]]
[[Category: Beta barrel]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 02:14:07 2009''

Latest revision as of 08:57, 14 February 2024

Crystal structure analysis of Dispersin B

1yht, resolution 2.00Å

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