1t5d: Difference between revisions

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{{Seed}}
[[Image:1t5d.png|left|200px]]


<!--
==4-Chlorobenzoyl-CoA Ligase/Synthetase bound to 4-chlorobenzoate==
The line below this paragraph, containing "STRUCTURE_1t5d", creates the "Structure Box" on the page.
<StructureSection load='1t5d' size='340' side='right'caption='[[1t5d]], [[Resolution|resolution]] 2.21&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1t5d]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Alcaligenes_sp._AL3007 Alcaligenes sp. AL3007]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T5D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1T5D FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.206&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=174:4-CHLORO-BENZOIC+ACID'>174</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
{{STRUCTURE_1t5d|  PDB=1t5d  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1t5d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1t5d OCA], [https://pdbe.org/1t5d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1t5d RCSB], [https://www.ebi.ac.uk/pdbsum/1t5d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1t5d ProSAT]</span></td></tr>
 
</table>
===4-Chlorobenzoyl-CoA Ligase/Synthetase bound to 4-chlorobenzoate===
== Function ==
 
[https://www.uniprot.org/uniprot/Q8GN86_9BURK Q8GN86_9BURK]  
 
== Evolutionary Conservation ==
<!--
[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_15236575}}, adds the Publication Abstract to the page
Check<jmol>
(as it appears on PubMed at http://www.pubmed.gov), where 15236575 is the PubMed ID number.
  <jmolCheckbox>
-->
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/t5/1t5d_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_15236575}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
1T5D is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Alcaligenes_sp._al3007 Alcaligenes sp. al3007]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T5D OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1t5d ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
<ref group="xtra">PMID:15236575</ref><references group="xtra"/>
</StructureSection>
[[Category: 4-chlorobenzoate--CoA ligase]]
[[Category: Alcaligenes sp. AL3007]]
[[Category: Alcaligenes sp. al3007]]
[[Category: Large Structures]]
[[Category: Dunaway-Mariano, D.]]
[[Category: Dunaway-Mariano D]]
[[Category: Gulick, A M.]]
[[Category: Gulick AM]]
[[Category: Lu, X.]]
[[Category: Lu X]]
[[Category: Adenylate-forming]]
[[Category: Coenzyme some]]
[[Category: Conformational change]]
[[Category: Domain alternation]]
[[Category: Ligase]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 02:44:07 2009''
Retrieved from "https://proteopedia.org/1t5d"