3dwu: Difference between revisions

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{{Seed}}
[[Image:3dwu.png|left|200px]]


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==Transition-state model conformation of the switch I region fitted into the cryo-EM map of the eEF2.80S.AlF4.GDP complex==
The line below this paragraph, containing "STRUCTURE_3dwu", creates the "Structure Box" on the page.
<SX load='3dwu' size='340' side='right' viewer='molstar' caption='[[3dwu]], [[Resolution|resolution]] 12.60&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3dwu]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DWU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DWU FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 12.6&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dwu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dwu OCA], [https://pdbe.org/3dwu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dwu RCSB], [https://www.ebi.ac.uk/pdbsum/3dwu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dwu ProSAT]</span></td></tr>
{{STRUCTURE_3dwu| PDB=3dwu |  SCENE= }}
</table>
== Function ==
[https://www.uniprot.org/uniprot/EFTU2_THET8 EFTU2_THET8] This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dw/3dwu_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dwu ConSurf].
<div style="clear:both"></div>


===Transition-state model conformation of the switch I region fitted into the cryo-EM map of the eEF2.80S.AlF4.GDP complex===
==See Also==
 
*[[Elongation factor 3D structures|Elongation factor 3D structures]]
 
__TOC__
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</SX>
The line below this paragraph, {{ABSTRACT_PUBMED_18644383}}, adds the Publication Abstract to the page
[[Category: Large Structures]]
(as it appears on PubMed at http://www.pubmed.gov), where 18644383 is the PubMed ID number.
[[Category: Thermus thermophilus HB8]]
-->
[[Category: Kjeldgaard M]]
{{ABSTRACT_PUBMED_18644383}}
[[Category: Nissen P]]
 
[[Category: Nyborg J]]
==About this Structure==
3DWU is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus_hb8 Thermus thermophilus hb8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DWU OCA].
 
==Reference==
<ref group="xtra">PMID:18644383</ref><references group="xtra"/>
[[Category: Thermus thermophilus hb8]]
[[Category: Kjeldgaard, M.]]
[[Category: Nissen, P.]]
[[Category: Nyborg, J.]]
[[Category: Acetylation]]
[[Category: Antibiotic resistance]]
[[Category: Biosynthetic protein]]
[[Category: Conserved switch i]]
[[Category: Cytoplasm]]
[[Category: Elongation factor]]
[[Category: Gtp-binding]]
[[Category: Membrane]]
[[Category: Methylation]]
[[Category: Nucleotide-binding]]
[[Category: Phosphoprotein]]
[[Category: Protein biosynthesis]]
[[Category: Transition state]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 03:38:38 2009''
Retrieved from "https://proteopedia.org/3dwu"