2alw: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
New page: left|200px<br /><applet load="2alw" size="450" color="white" frame="true" align="right" spinBox="true" caption="2alw, resolution 1.86Å" /> '''Golgi alpha-mannosid...
 
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
No edit summary
 
(14 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2alw.gif|left|200px]]<br /><applet load="2alw" size="450" color="white" frame="true" align="right" spinBox="true"
caption="2alw, resolution 1.86&Aring;" />
'''Golgi alpha-mannosidase II complex with Noeuromycin'''<br />


==About this Structure==
==Golgi alpha-mannosidase II complex with Noeuromycin==
2ALW is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Drosophila_melanogaster Drosophila melanogaster] with NAG, ZN, MNM and MPD as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Mannosyl-oligosaccharide_1,3-1,6-alpha-mannosidase Mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.114 3.2.1.114] Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=2ALW OCA].
<StructureSection load='2alw' size='340' side='right'caption='[[2alw]], [[Resolution|resolution]] 1.86&Aring;' scene=''>
[[Category: Drosophila melanogaster]]
== Structural highlights ==
[[Category: Mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase]]
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ALW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ALW FirstGlance]. <br>
[[Category: Single protein]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.86&#8491;</td></tr>
[[Category: Bols, M.B.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MNM:(2S,3S,4R,5R)-2,3,4-TRIHYDROXY-5-HYDROXYMETHYL-PIPERIDINE'>MNM</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
[[Category: Kuntz, D.A.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2alw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2alw OCA], [https://pdbe.org/2alw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2alw RCSB], [https://www.ebi.ac.uk/pdbsum/2alw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2alw ProSAT]</span></td></tr>
[[Category: Liu, H.]]
</table>
[[Category: Rose, D.R.]]
== Evolutionary Conservation ==
[[Category: MNM]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: MPD]]
Check<jmol>
[[Category: NAG]]
  <jmolCheckbox>
[[Category: ZN]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/al/2alw_consurf.spt"</scriptWhenChecked>
[[Category: glycosyl hydrolase family 38]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2alw ConSurf].
<div style="clear:both"></div>


''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 08:12:45 2007''
==See Also==
*[[Mannosidase 3D structures|Mannosidase 3D structures]]
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Bols MB]]
[[Category: Kuntz DA]]
[[Category: Liu H]]
[[Category: Rose DR]]
Retrieved from "https://proteopedia.org/2alw"