1ne9: Difference between revisions

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{{Seed}}
[[Image:1ne9.png|left|200px]]


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==Crystal Structure of Weissella viridescens FemX at 1.7 Ang Resolution==
The line below this paragraph, containing "STRUCTURE_1ne9", creates the "Structure Box" on the page.
<StructureSection load='1ne9' size='340' side='right'caption='[[1ne9]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1ne9]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Weissella_viridescens Weissella viridescens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NE9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1NE9 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
{{STRUCTURE_1ne9|  PDB=1ne9  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ne9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ne9 OCA], [https://pdbe.org/1ne9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ne9 RCSB], [https://www.ebi.ac.uk/pdbsum/1ne9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ne9 ProSAT]</span></td></tr>
 
</table>
===Crystal Structure of Weissella viridescens FemX at 1.7 Ang Resolution===
== Function ==
 
[https://www.uniprot.org/uniprot/FEMX_WEIVI FEMX_WEIVI] Involved in the synthesis of the bacterial cell wall. Catalyzes the addition of alanine into the interchain peptide bridge of peptidoglycan precursor using aminoacyl-tRNA(Ala) as amino acid donor. This alanine is added to the epsilon-amino group of the L-lysine of the peptidoglycan UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamyl-L-lysyl-D-alanyl-D-alanine, in a ribosome-independent mechanism (PubMed:11083873, PubMed:4248527, PubMed:12679335, PubMed:15901708, PubMed:23744707). Specific for UDP-N-acetyl-muramoyl-pentapeptide. Has no activity toward UDP-N-acetyl-muramoyl-tetrapeptide or UDP-N-acetyl-muramoyl-tripeptide (PubMed:15901708). Also acts on L-seryl-tRNA(Ser) (PubMed:4248527).<ref>PMID:11083873</ref> <ref>PMID:12679335</ref> <ref>PMID:15901708</ref> <ref>PMID:23744707</ref> <ref>PMID:4248527</ref>
 
== Evolutionary Conservation ==
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    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ne/1ne9_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_14962386}}
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    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
1NE9 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Weissella_viridescens Weissella viridescens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NE9 OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ne9 ConSurf].
 
<div style="clear:both"></div>
==Reference==
== References ==
<ref group="xtra">PMID:14962386</ref><references group="xtra"/>
<references/>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Weissella viridescens]]
[[Category: Weissella viridescens]]
[[Category: Arthur, M.]]
[[Category: Arthur M]]
[[Category: Biarrotte-Sorin, S.]]
[[Category: Biarrotte-Sorin S]]
[[Category: Delettre, J.]]
[[Category: Delettre J]]
[[Category: Maillard, A P.]]
[[Category: Maillard AP]]
[[Category: Mayer, C.]]
[[Category: Mayer C]]
[[Category: Sougakoff, W.]]
[[Category: Sougakoff W]]
[[Category: Protein]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 05:04:45 2009''
Retrieved from "https://proteopedia.org/1ne9"