1nw8: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,613 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,613 edits
No edit summary
 
(10 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:1nw8.png|left|200px]]


<!--
==Structure of L72P mutant beta class N6-adenine DNA methyltransferase RsrI==
The line below this paragraph, containing "STRUCTURE_1nw8", creates the "Structure Box" on the page.
<StructureSection load='1nw8' size='340' side='right'caption='[[1nw8]], [[Resolution|resolution]] 2.25&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1nw8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Cereibacter_sphaeroides Cereibacter sphaeroides]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NW8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1NW8 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.25&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
{{STRUCTURE_1nw8| PDB=1nw8 |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1nw8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1nw8 OCA], [https://pdbe.org/1nw8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1nw8 RCSB], [https://www.ebi.ac.uk/pdbsum/1nw8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1nw8 ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/MTR1_CERSP MTR1_CERSP] A beta subtype methylase, recognizes the double-stranded sequence 5'-GAATTC-3', methylates A-3 on both strands, and protects the DNA from cleavage by the RsrI endonuclease.<ref>PMID:2690017</ref> <ref>PMID:12654995</ref>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nw/1nw8_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1nw8 ConSurf].
<div style="clear:both"></div>


===Structure of L72P mutant beta class N6-adenine DNA methyltransferase RsrI===
==See Also==
 
*[[DNA methyltransferase 3D structures|DNA methyltransferase 3D structures]]
 
== References ==
<!--
<references/>
The line below this paragraph, {{ABSTRACT_PUBMED_12732637}}, adds the Publication Abstract to the page
__TOC__
(as it appears on PubMed at http://www.pubmed.gov), where 12732637 is the PubMed ID number.
</StructureSection>
-->
[[Category: Cereibacter sphaeroides]]
{{ABSTRACT_PUBMED_12732637}}
[[Category: Large Structures]]
 
[[Category: Churchill MEA]]
==About this Structure==
[[Category: Gumport RI]]
1NW8 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Rhodobacter_sphaeroides Rhodobacter sphaeroides]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NW8 OCA].
[[Category: Scavetta RD]]
 
[[Category: Thomas CB]]
==Reference==
<ref group="xtra">PMID:12732637</ref><references group="xtra"/>
[[Category: Rhodobacter sphaeroides]]
[[Category: Churchill, M E.A.]]
[[Category: Gumport, R I.]]
[[Category: Scavetta, R D.]]
[[Category: Thomas, C B.]]
[[Category: Adenine dna methyltransferase]]
[[Category: Rossmann fold]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 05:36:10 2009''

Latest revision as of 08:00, 14 February 2024

Structure of L72P mutant beta class N6-adenine DNA methyltransferase RsrI

1nw8, resolution 2.25Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "https://proteopedia.org/index.php?title=1nw8&oldid=4052710"