2ark: Difference between revisions

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New page: left|200px<br /><applet load="2ark" size="450" color="white" frame="true" align="right" spinBox="true" caption="2ark, resolution 2.40Å" /> '''Structure of a flavo...
 
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[[Image:2ark.gif|left|200px]]<br /><applet load="2ark" size="450" color="white" frame="true" align="right" spinBox="true"
caption="2ark, resolution 2.40&Aring;" />
'''Structure of a flavodoxin from Aquifex aeolicus'''<br />


==About this Structure==
==Structure of a flavodoxin from Aquifex aeolicus==
2ARK is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus] with PO4 and GOL as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=2ARK OCA].  
<StructureSection load='2ark' size='340' side='right'caption='[[2ark]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[2ark]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ARK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ARK FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ark FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ark OCA], [https://pdbe.org/2ark PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ark RCSB], [https://www.ebi.ac.uk/pdbsum/2ark PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ark ProSAT], [https://www.topsan.org/Proteins/MCSG/2ark TOPSAN]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/FLAV_AQUAE FLAV_AQUAE] Low-potential electron donor to a number of redox enzymes (By similarity).
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ar/2ark_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ark ConSurf].
<div style="clear:both"></div>
 
==See Also==
*[[Flavodoxin 3D structures|Flavodoxin 3D structures]]
__TOC__
</StructureSection>
[[Category: Aquifex aeolicus]]
[[Category: Aquifex aeolicus]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Cuff, M.E.]]
[[Category: Cuff ME]]
[[Category: Cymborowski, M.]]
[[Category: Cymborowski M]]
[[Category: Joachimiak, A.]]
[[Category: Joachimiak A]]
[[Category: MCSG, Midwest.Center.for.Structural.Genomics.]]
[[Category: Minor W]]
[[Category: Minor, W.]]
[[Category: Quartey P]]
[[Category: Quartey, P.]]
[[Category: Zhou M]]
[[Category: Zhou, M.]]
[[Category: GOL]]
[[Category: PO4]]
[[Category: aquifex aeolicus]]
[[Category: flavodoxin]]
[[Category: fmn]]
[[Category: mcsg]]
[[Category: midwest center for structural genomics]]
[[Category: protein structure initiative]]
[[Category: psi]]
[[Category: structural genomics]]
 
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