1yad: Difference between revisions

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{{Seed}}
[[Image:1yad.png|left|200px]]


<!--
==Structure of TenI from Bacillus subtilis==
The line below this paragraph, containing "STRUCTURE_1yad", creates the "Structure Box" on the page.
<StructureSection load='1yad' size='340' side='right'caption='[[1yad]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1yad]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YAD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YAD FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=144:TRIS-HYDROXYMETHYL-METHYL-AMMONIUM'>144</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
{{STRUCTURE_1yad|  PDB=1yad  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yad FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yad OCA], [https://pdbe.org/1yad PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yad RCSB], [https://www.ebi.ac.uk/pdbsum/1yad PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yad ProSAT]</span></td></tr>
 
</table>
===Structure of TenI from Bacillus subtilis===
== Function ==
 
[https://www.uniprot.org/uniprot/TENI_BACSU TENI_BACSU] Reduces the stimulatory effect of the TenA transcriptional activator on production of certain extracellular enzymes. Is not an essential protein, but affects the sporulation frequency.
 
== Evolutionary Conservation ==
<!--
[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_15709744}}, adds the Publication Abstract to the page
Check<jmol>
(as it appears on PubMed at http://www.pubmed.gov), where 15709744 is the PubMed ID number.
  <jmolCheckbox>
-->
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ya/1yad_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_15709744}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
1YAD is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YAD OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1yad ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
<ref group="xtra">PMID:15709744</ref><references group="xtra"/>
</StructureSection>
[[Category: Bacillus subtilis]]
[[Category: Bacillus subtilis]]
[[Category: Begley, T P.]]
[[Category: Large Structures]]
[[Category: Ealick, S E.]]
[[Category: Begley TP]]
[[Category: Haas, A L.]]
[[Category: Ealick SE]]
[[Category: Park, J H.]]
[[Category: Haas AL]]
[[Category: Toms, A V.]]
[[Category: Park J-H]]
[[Category: Tim barrel]]
[[Category: Toms AV]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 06:00:02 2009''

Latest revision as of 08:56, 14 February 2024

Structure of TenI from Bacillus subtilis

1yad, resolution 2.10Å

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