2fqx: Difference between revisions

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{{Seed}}
[[Image:2fqx.png|left|200px]]


<!--
==PnrA from Treponema pallidum complexed with guanosine==
The line below this paragraph, containing "STRUCTURE_2fqx", creates the "Structure Box" on the page.
<StructureSection load='2fqx' size='340' side='right'caption='[[2fqx]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2fqx]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Treponema_pallidum Treponema pallidum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FQX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FQX FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GMP:GUANOSINE'>GMP</scene></td></tr>
{{STRUCTURE_2fqx|  PDB=2fqx  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fqx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fqx OCA], [https://pdbe.org/2fqx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fqx RCSB], [https://www.ebi.ac.uk/pdbsum/2fqx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fqx ProSAT]</span></td></tr>
 
</table>
===PnrA from Treponema pallidum complexed with guanosine===
== Function ==
 
[https://www.uniprot.org/uniprot/TMPC_TREPA TMPC_TREPA] Binds purine nucleosides and may play a role in purine nucleoside uptake. May be part of an ABC-type nucleoside uptake system. Has highest affinity for guanosine, followed by inosine and adenosine. Has very low affinity for cytidine and does not bind thymidine.<ref>PMID:16418175</ref>  
 
== Evolutionary Conservation ==
<!--
[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_16418175}}, adds the Publication Abstract to the page
Check<jmol>
(as it appears on PubMed at http://www.pubmed.gov), where 16418175 is the PubMed ID number.
  <jmolCheckbox>
-->
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fq/2fqx_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_16418175}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
2FQX is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Treponema_pallidum Treponema pallidum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FQX OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2fqx ConSurf].
 
<div style="clear:both"></div>
==Reference==
== References ==
<ref group="xtra">PMID:16418175</ref><references group="xtra"/>
<references/>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Treponema pallidum]]
[[Category: Treponema pallidum]]
[[Category: Brautigam, C A.]]
[[Category: Brautigam CA]]
[[Category: Deka, R K.]]
[[Category: Deka RK]]
[[Category: Machius, M.]]
[[Category: Machius M]]
[[Category: Norgard, M V.]]
[[Category: Norgard MV]]
[[Category: Tomchick, D R.]]
[[Category: Tomchick DR]]
[[Category: Abc transport system]]
[[Category: Guanosine]]
[[Category: Ligand-binding protein]]
[[Category: Tmpc]]
[[Category: Tp0319]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 08:07:50 2009''
Retrieved from "https://proteopedia.org/2fqx"