2pfu: Difference between revisions

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{{Seed}}
[[Image:2pfu.png|left|200px]]


<!--
==NMR structure determination of the periplasmic domain of ExbD from E.coli==
The line below this paragraph, containing "STRUCTURE_2pfu", creates the "Structure Box" on the page.
<StructureSection load='2pfu' size='340' side='right'caption='[[2pfu]]' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2pfu]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PFU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PFU FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pfu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pfu OCA], [https://pdbe.org/2pfu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pfu RCSB], [https://www.ebi.ac.uk/pdbsum/2pfu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pfu ProSAT]</span></td></tr>
{{STRUCTURE_2pfu|  PDB=2pfu |  SCENE= }}
</table>
== Function ==
[https://www.uniprot.org/uniprot/EXBD_ECOLI EXBD_ECOLI] Involved in the TonB-dependent energy-dependent transport of various receptor-bound substrates.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pf/2pfu_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pfu ConSurf].
<div style="clear:both"></div>


===NMR strcuture determination of the periplasmic domain of ExbD from E.coli===
==See Also==
 
*[[ExbD|ExbD]]
 
__TOC__
<!--
</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_17927700}}, adds the Publication Abstract to the page
[[Category: Escherichia coli K-12]]
(as it appears on PubMed at http://www.pubmed.gov), where 17927700 is the PubMed ID number.
[[Category: Large Structures]]
-->
[[Category: Garcia-Herrero A]]
{{ABSTRACT_PUBMED_17927700}}
[[Category: Howard PS]]
 
[[Category: Peacock SR]]
==About this Structure==
[[Category: Vogel HJ]]
2PFU is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PFU OCA].
 
==Reference==
<ref group="xtra">PMID:17927700</ref><references group="xtra"/>
[[Category: Escherichia coli]]
[[Category: Garcia-Herrero, A.]]
[[Category: Howard, P S.]]
[[Category: Peacock, S R.]]
[[Category: Vogel, H J.]]
[[Category: Exbd]]
[[Category: Periplasmic domain]]
[[Category: Proton motive force]]
[[Category: Tonb system]]
[[Category: Transport protein]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 08:39:36 2009''
Retrieved from "https://proteopedia.org/2pfu"