2bdr: Difference between revisions
From Proteopedia
Jump to navigationJump to search
New page: left|200px<br /><applet load="2bdr" size="450" color="white" frame="true" align="right" spinBox="true" caption="2bdr, resolution 1.60Å" /> '''Crystal Structure of... |
No edit summary |
||
| (16 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
== | ==Crystal Structure of the Putative Ureidoglycolate hydrolase PP4288 from Pseudomonas putida, Northeast Structural Genomics Target PpR49== | ||
<StructureSection load='2bdr' size='340' side='right'caption='[[2bdr]], [[Resolution|resolution]] 1.60Å' scene=''> | |||
== Structural highlights == | |||
[ | <table><tr><td colspan='2'>[[2bdr]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_putida_KT2440 Pseudomonas putida KT2440]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BDR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2BDR FirstGlance]. <br> | ||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6Å</td></tr> | |||
[ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> | ||
[ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2bdr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bdr OCA], [https://pdbe.org/2bdr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2bdr RCSB], [https://www.ebi.ac.uk/pdbsum/2bdr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2bdr ProSAT], [https://www.topsan.org/Proteins/NESGC/2bdr TOPSAN]</span></td></tr> | ||
[ | </table> | ||
[[ | == Function == | ||
[ | [https://www.uniprot.org/uniprot/ALLA_PSEPK ALLA_PSEPK] Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source (By similarity).[HAMAP-Rule:MF_00616] | ||
[ | == Evolutionary Conservation == | ||
[[Category: | [[Image:Consurf_key_small.gif|200px|right]] | ||
[[Category: | Check<jmol> | ||
[[Category: | <jmolCheckbox> | ||
[[Category: | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bd/2bdr_consurf.spt"</scriptWhenChecked> | ||
[[Category: | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | ||
[[Category: | <text>to colour the structure by Evolutionary Conservation</text> | ||
[[Category: | </jmolCheckbox> | ||
[[Category: | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2bdr ConSurf]. | ||
[[Category: | <div style="clear:both"></div> | ||
[[Category: | __TOC__ | ||
[[Category: | </StructureSection> | ||
[[Category: Large Structures]] | |||
[[Category: Pseudomonas putida KT2440]] | |||
[[Category: Abashidze M]] | |||
[[Category: Acton TB]] | |||
[[Category: Conover K]] | |||
[[Category: Forouhar F]] | |||
[[Category: Ho CK]] | |||
[[Category: Hunt JF]] | |||
[[Category: Jayaraman S]] | |||
[[Category: Montelione GT]] | |||
[[Category: Tong L]] | |||
Latest revision as of 05:06, 17 October 2024
Crystal Structure of the Putative Ureidoglycolate hydrolase PP4288 from Pseudomonas putida, Northeast Structural Genomics Target PpR49
| ||||||||||||
