2o6e: Difference between revisions

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{{Seed}}
[[Image:2o6e.png|left|200px]]


<!--
==Structure of native rTp34 from Treponema pallidum from zinc-soaked crystals==
The line below this paragraph, containing "STRUCTURE_2o6e", creates the "Structure Box" on the page.
<StructureSection load='2o6e' size='340' side='right'caption='[[2o6e]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2o6e]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Treponema_pallidum Treponema pallidum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O6E OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2O6E FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
{{STRUCTURE_2o6e|  PDB=2o6e  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2o6e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o6e OCA], [https://pdbe.org/2o6e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2o6e RCSB], [https://www.ebi.ac.uk/pdbsum/2o6e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2o6e ProSAT]</span></td></tr>
 
</table>
===Structure of native rTp34 from Treponema pallidum from zinc-soaked crystals===
== Function ==
 
[https://www.uniprot.org/uniprot/TA34_TREPA TA34_TREPA] This antigen is a pathogen-specific membrane immunogen.
 
== Evolutionary Conservation ==
<!--
[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_17192261}}, adds the Publication Abstract to the page
Check<jmol>
(as it appears on PubMed at http://www.pubmed.gov), where 17192261 is the PubMed ID number.
  <jmolCheckbox>
-->
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o6/2o6e_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_17192261}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
2O6E is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Treponema_pallidum Treponema pallidum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O6E OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2o6e ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
<ref group="xtra">PMID:17192261</ref><references group="xtra"/>
</StructureSection>
[[Category: Large Structures]]
[[Category: Treponema pallidum]]
[[Category: Treponema pallidum]]
[[Category: Brautigam, C A.]]
[[Category: Brautigam CA]]
[[Category: Deka, R K.]]
[[Category: Deka RK]]
[[Category: Lumpkins, S B.]]
[[Category: Lumpkins SB]]
[[Category: Machius, M.]]
[[Category: Machius M]]
[[Category: Norgard, M V.]]
[[Category: Norgard MV]]
[[Category: Tomchick, D R.]]
[[Category: Tomchick DR]]
[[Category: Dimer]]
[[Category: Ig-fold]]
[[Category: Metal-ion binding]]
[[Category: Syphili]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 11:07:08 2009''

Latest revision as of 06:28, 3 April 2024

Structure of native rTp34 from Treponema pallidum from zinc-soaked crystals

2o6e, resolution 1.90Å

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