2cvc: Difference between revisions
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New page: left|200px<br /><applet load="2cvc" size="450" color="white" frame="true" align="right" spinBox="true" caption="2cvc, resolution 2.00Å" /> '''Crystal structure of... |
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== | ==Crystal structure of High-Molecular Weight Cytochrome c from Desulfovibrio vulgaris (Hildenborough)== | ||
<StructureSection load='2cvc' size='340' side='right'caption='[[2cvc]], [[Resolution|resolution]] 2.00Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[2cvc]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Desulfovibrio_vulgaris Desulfovibrio vulgaris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CVC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CVC FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2Å</td></tr> | |||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEC:HEME+C'>HEC</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2cvc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cvc OCA], [https://pdbe.org/2cvc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2cvc RCSB], [https://www.ebi.ac.uk/pdbsum/2cvc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2cvc ProSAT]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/HMWC_NITV2 HMWC_NITV2] HMWC (high-molecular-weight cytochrome c), ORF2, ORF3, ORF4, ORF5 and ORF6 in the HMC operon form a transmembrane protein complex that allows electron flow from the periplasmic hydrogenase to the cytoplasmic enzymes that catalyze reduction of sulfates. | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cv/2cvc_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2cvc ConSurf]. | |||
<div style="clear:both"></div> | |||
==See Also== | |||
*[[Cytochrome C 3D structures|Cytochrome C 3D structures]] | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Desulfovibrio vulgaris]] | [[Category: Desulfovibrio vulgaris]] | ||
[[Category: | [[Category: Large Structures]] | ||
[[Category: Akutsu | [[Category: Akutsu H]] | ||
[[Category: Higuchi | [[Category: Higuchi Y]] | ||
[[Category: Kitamura | [[Category: Kitamura M]] | ||
[[Category: Morimoto | [[Category: Morimoto Y]] | ||
[[Category: Ozawa | [[Category: Ozawa K]] | ||
[[Category: Sato | [[Category: Sato M]] | ||
[[Category: Shibata | [[Category: Shibata N]] | ||
[[Category: Suto | [[Category: Suto K]] | ||
[[Category: Takayama | [[Category: Takayama Y]] | ||
[[Category: Yasuoka | [[Category: Yasuoka N]] | ||
Latest revision as of 09:04, 6 November 2024
Crystal structure of High-Molecular Weight Cytochrome c from Desulfovibrio vulgaris (Hildenborough)
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