2d4g: Difference between revisions
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New page: left|200px<br /><applet load="2d4g" size="450" color="white" frame="true" align="right" spinBox="true" caption="2d4g, resolution 2.300Å" /> '''Structure of YjcG p... |
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== | ==Structure of YjcG protein, a putative 2'-5' RNA ligase from Bacillus subtilis== | ||
<StructureSection load='2d4g' size='340' side='right'caption='[[2d4g]], [[Resolution|resolution]] 2.30Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[2d4g]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D4G OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2D4G FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3Å</td></tr> | |||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2d4g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d4g OCA], [https://pdbe.org/2d4g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2d4g RCSB], [https://www.ebi.ac.uk/pdbsum/2d4g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2d4g ProSAT]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/YJCG_BACSU YJCG_BACSU] | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d4/2d4g_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2d4g ConSurf]. | |||
<div style="clear:both"></div> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Bacillus subtilis]] | [[Category: Bacillus subtilis]] | ||
[[Category: | [[Category: Large Structures]] | ||
[[Category: Li | [[Category: Li D]] | ||
[[Category: Liang | [[Category: Liang YH]] | ||
[[Category: Su | [[Category: Su XD]] | ||
Latest revision as of 07:54, 30 October 2024
Structure of YjcG protein, a putative 2'-5' RNA ligase from Bacillus subtilis
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