2d69: Difference between revisions

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New page: left|200px<br /><applet load="2d69" size="450" color="white" frame="true" align="right" spinBox="true" caption="2d69, resolution 1.90Å" /> '''Crystal structure of...
 
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[[Image:2d69.gif|left|200px]]<br /><applet load="2d69" size="450" color="white" frame="true" align="right" spinBox="true"
caption="2d69, resolution 1.90&Aring;" />
'''Crystal structure of the complex of sulfate ion and octameric ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) from Pyrococcus horikoshii OT3 (form-2 crystal)'''<br />


==About this Structure==
==Crystal structure of the complex of sulfate ion and octameric ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) from Pyrococcus horikoshii OT3 (form-2 crystal)==
2D69 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii] with SO4 as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Ribulose-bisphosphate_carboxylase Ribulose-bisphosphate carboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.39 4.1.1.39] Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=2D69 OCA].
<StructureSection load='2d69' size='340' side='right'caption='[[2d69]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
[[Category: Pyrococcus horikoshii]]
== Structural highlights ==
[[Category: Ribulose-bisphosphate carboxylase]]
<table><tr><td colspan='2'>[[2d69]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D69 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2D69 FirstGlance]. <br>
[[Category: Single protein]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
[[Category: Akasaka, R.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
[[Category: Mishima, C.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2d69 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d69 OCA], [https://pdbe.org/2d69 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2d69 RCSB], [https://www.ebi.ac.uk/pdbsum/2d69 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2d69 ProSAT], [https://www.topsan.org/Proteins/RSGI/2d69 TOPSAN]</span></td></tr>
[[Category: Mizohata, E.]]
</table>
[[Category: RSGI, RIKEN.Structural.Genomics/Proteomics.Initiative.]]
== Function ==
[[Category: Shirouzu, M.]]
[https://www.uniprot.org/uniprot/RBL_PYRHO RBL_PYRHO] Catalyzes the addition of molecular CO(2) and H(2)O to ribulose 1,5-bisphosphate (RuBP), generating two molecules of 3-phosphoglycerate (3-PGA). Functions in an archaeal AMP degradation pathway, together with AMP phosphorylase and R15P isomerase (By similarity).
[[Category: Terada, T.]]
[[Category: Uda, H.]]
[[Category: Yokoyama, S.]]
[[Category: SO4]]
[[Category: alpha/beta barrel]]
[[Category: national project on protein structural and functional analyses]]
[[Category: nppsfa]]
[[Category: riken structural genomics/proteomics initiative]]
[[Category: rsgi]]
[[Category: structural genomics]]


''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 09:27:52 2007''
==See Also==
*[[RuBisCO 3D structures|RuBisCO 3D structures]]
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Pyrococcus horikoshii OT3]]
[[Category: Akasaka R]]
[[Category: Mishima C]]
[[Category: Mizohata E]]
[[Category: Shirouzu M]]
[[Category: Terada T]]
[[Category: Uda H]]
[[Category: Yokoyama S]]