1orr: Difference between revisions

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{{Seed}}
[[Image:1orr.png|left|200px]]


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==Crystal Structure of CDP-Tyvelose 2-Epimerase complexed with NAD and CDP==
The line below this paragraph, containing "STRUCTURE_1orr", creates the "Structure Box" on the page.
<StructureSection load='1orr' size='340' side='right'caption='[[1orr]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1orr]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhi Salmonella enterica subsp. enterica serovar Typhi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ORR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ORR FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CDP:CYTIDINE-5-DIPHOSPHATE'>CDP</scene>, <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene></td></tr>
{{STRUCTURE_1orr|  PDB=1orr  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1orr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1orr OCA], [https://pdbe.org/1orr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1orr RCSB], [https://www.ebi.ac.uk/pdbsum/1orr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1orr ProSAT]</span></td></tr>
 
</table>
===Crystal Structure of CDP-Tyvelose 2-Epimerase complexed with NAD and CDP===
== Function ==
 
[https://www.uniprot.org/uniprot/RFBE_SALTI RFBE_SALTI] Catalyzes the isomeration of CDP-paratose to CDP-tyvelose.
 
== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_12642575}}, adds the Publication Abstract to the page
Check<jmol>
(as it appears on PubMed at http://www.pubmed.gov), where 12642575 is the PubMed ID number.
  <jmolCheckbox>
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    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/or/1orr_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_12642575}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
1ORR is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Salmonella_typhi Salmonella typhi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ORR OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1orr ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
<ref group="xtra">PMID:12642575</ref><references group="xtra"/>
</StructureSection>
[[Category: Salmonella typhi]]
[[Category: Large Structures]]
[[Category: Holden, H M.]]
[[Category: Salmonella enterica subsp. enterica serovar Typhi]]
[[Category: Koropatkin, N M.]]
[[Category: Holden HM]]
[[Category: Liu, H.]]
[[Category: Koropatkin NM]]
[[Category: Rossmann fold]]
[[Category: Liu H]]
[[Category: Short-chain dehydrogenase/reductase]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 13:29:45 2009''

Latest revision as of 08:02, 14 February 2024

Crystal Structure of CDP-Tyvelose 2-Epimerase complexed with NAD and CDP

1orr, resolution 1.50Å

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