1yn4: Difference between revisions

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{{Seed}}
[[Image:1yn4.png|left|200px]]


<!--
==Crystal Structures of EAP Domains from Staphylococcus aureus Reveal an Unexpected Homology to Bacterial Superantigens==
The line below this paragraph, containing "STRUCTURE_1yn4", creates the "Structure Box" on the page.
<StructureSection load='1yn4' size='340' side='right'caption='[[1yn4]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1yn4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YN4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YN4 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
{{STRUCTURE_1yn4|  PDB=1yn4  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yn4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yn4 OCA], [https://pdbe.org/1yn4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yn4 RCSB], [https://www.ebi.ac.uk/pdbsum/1yn4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yn4 ProSAT]</span></td></tr>
 
</table>
===Crystal Structures of EAP Domains from Staphylococcus aureus Reveal an Unexpected Homology to Bacterial Superantigens===
== Function ==
 
[https://www.uniprot.org/uniprot/A0A0H3K0M1_STAAM A0A0H3K0M1_STAAM]
 
== Evolutionary Conservation ==
<!--
[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_15691839}}, adds the Publication Abstract to the page
Check<jmol>
(as it appears on PubMed at http://www.pubmed.gov), where 15691839 is the PubMed ID number.
  <jmolCheckbox>
-->
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yn/1yn4_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_15691839}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
1YN4 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YN4 OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1yn4 ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
<ref group="xtra">PMID:15691839</ref><references group="xtra"/>
</StructureSection>
[[Category: Large Structures]]
[[Category: Staphylococcus aureus]]
[[Category: Staphylococcus aureus]]
[[Category: Geisbrecht, B V.]]
[[Category: Geisbrecht BV]]
[[Category: Hamaoka, B Y.]]
[[Category: Hamaoka BY]]
[[Category: Leahy, D J.]]
[[Category: Leahy DJ]]
[[Category: Perman, B.]]
[[Category: Perman B]]
[[Category: Zemla, A.]]
[[Category: Zemla A]]
[[Category: Extracellular adherence protein]]
[[Category: Staphylococcus aureus]]
[[Category: Toxin]]
[[Category: Virulence factor]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 14:14:18 2009''

Latest revision as of 08:58, 14 February 2024

Crystal Structures of EAP Domains from Staphylococcus aureus Reveal an Unexpected Homology to Bacterial Superantigens

1yn4, resolution 1.80Å

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