1pvw: Difference between revisions

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{{Seed}}
[[Image:1pvw.png|left|200px]]


<!--
==3,4-dihydroxy-2-butanone 4-phosphate synthase from M. jannaschii==
The line below this paragraph, containing "STRUCTURE_1pvw", creates the "Structure Box" on the page.
<StructureSection load='1pvw' size='340' side='right'caption='[[1pvw]], [[Resolution|resolution]] 2.45&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1pvw]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii Methanocaldococcus jannaschii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PVW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1PVW FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.45&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
{{STRUCTURE_1pvw|  PDB=1pvw  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1pvw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1pvw OCA], [https://pdbe.org/1pvw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1pvw RCSB], [https://www.ebi.ac.uk/pdbsum/1pvw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1pvw ProSAT]</span></td></tr>
 
</table>
===3,4-dihydroxy-2-butanone 4-phosphate synthase from M. jannaschii===
== Function ==
 
[https://www.uniprot.org/uniprot/RIBB_METJA RIBB_METJA] Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.<ref>PMID:12200440</ref>  
 
== Evolutionary Conservation ==
<!--
[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_12904291}}, adds the Publication Abstract to the page
Check<jmol>
(as it appears on PubMed at http://www.pubmed.gov), where 12904291 is the PubMed ID number.
  <jmolCheckbox>
-->
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pv/1pvw_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_12904291}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
1PVW is a 3 chains structure of sequences from [http://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii Methanocaldococcus jannaschii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PVW OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1pvw ConSurf].
 
<div style="clear:both"></div>
==Reference==
== References ==
<ref group="xtra">PMID:12904291</ref><references group="xtra"/>
<references/>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Methanocaldococcus jannaschii]]
[[Category: Methanocaldococcus jannaschii]]
[[Category: Bacher, A.]]
[[Category: Bacher A]]
[[Category: Fischer, M.]]
[[Category: Fischer M]]
[[Category: Huber, R.]]
[[Category: Huber R]]
[[Category: Richter, G.]]
[[Category: Richter G]]
[[Category: Schiffmann, S.]]
[[Category: Schiffmann S]]
[[Category: Steinbacher, S.]]
[[Category: Steinbacher S]]
[[Category: Riboflavin biosynthesis]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 14:34:44 2009''

Latest revision as of 13:28, 13 March 2024

3,4-dihydroxy-2-butanone 4-phosphate synthase from M. jannaschii

1pvw, resolution 2.45Å

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